RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 C1QL4Q86Z23 238 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 LSM10Q969L4 123 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 MMP24Q9Y5R2 645 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 SYNGR2O43760 224 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 IFNA5P01569 189 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 HBE1P02100 147 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 ERVK11-1P61568 191 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 CACNA1GO43497 2377 aa13.28□□□□□ -0.28
TM9SF1-208ENST00000529332 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 IGHV3-64DA0A0J9YX35 117 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 LOC102723971A0A1B0GUV8 181 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 AP4M1O00189 453 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 PRRG2O14669 202 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 MDH2P40926 338 aaKnown RBP13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 ERVS71-1P61550 626 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 KHDC3LQ587J8 217 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 SLC25A24Q6NUK1 477 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 ZNF343Q6P1L6 599 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 Q6ZT83 130 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 RTL8AQ9BWD3 113 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 RPRMQ9NS64 109 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 PSENENQ9NZ42 101 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 TREM2Q9NZC2 230 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 TRAPPC2LQ9UL33 140 aa13.27□□□□□ -0.28
TM9SF1-208ENST00000529332 A0A087WWC5 75 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 IFNA17P01571 189 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF16P17020 682 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF726P1Q15940 193 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 GFRALQ6UXV0 394 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 MOB1BQ7L9L4 216 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF525Q8N782 197 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 OR2J1Q9GZK6 312 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 KCNS2Q9ULS6 477 aa13.27□□□□□ -0.29
TM9SF1-208ENST00000529332 PIGBOS1A0A0B4J2F0 54 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 LRP5LA4QPB2 252 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 CLN5O75503 358 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 S100A9P06702 114 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 CXCL1P09341 107 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 TIMP3P35625 211 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 RPS10P46783 165 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 RAB2AP61019 212 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 KLRB1Q12918 225 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 ELOBQ15370 118 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 Q8WTZ3 238 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 SNRNP40Q96DI7 357 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 GNG13Q9P2W3 67 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 PROCRQ9UNN8 238 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
TM9SF1-208ENST00000529332 CDIPTO14735 213 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 SMPD2O60906 423 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 ERVFRD-1P60508 538 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 RBPJQ06330 500 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 TBC1D28Q2M2D7 210 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 VWA1Q6PCB0 445 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 DRAM1Q8N682 238 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 NIPSNAP3BQ9BS92 247 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 PLSCR4Q9NRQ2 329 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 MBNL3Q9NUK0 354 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 LAMA5O15230 3695 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 BOD1L1Q8NFC6 3051 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 KIAA2026Q5HYC2 2103 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 SVILO95425 2214 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 PPIHO43447 177 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 SFTPCP11686 197 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 SELEP16581 610 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 CEACAM6P40199 344 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 PPP1CBP62140 327 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 NCMAPQ5T1S8 102 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 SCGB1C1Q8TD33 95 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF251Q9BRH9 671 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 BCL2L14Q9BZR8 327 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-208ENST00000529332 ATMQ13315 3056 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 FOXF2Q12947 444 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 ZNF146Q15072 292 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 SLC35E3Q7Z769 313 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 Q8IYB0 196 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 C1orf162Q8NEQ5 155 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 OR10G4Q8NGN3 311 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 PRORYQ9H606 182 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 NIT2Q9NQR4 276 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 POLDIP2Q9Y2S7 368 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 WIPI2Q9Y4P8 454 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 URGCP-MRPS24S4R325 110 aa13.24□□□□□ -0.29
TM9SF1-208ENST00000529332 TNFSF13O75888 250 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms