RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 TRAV39A0A0B4J263 110 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 TRAV24A0A0B4J272 114 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 NKX2-6A6NCS4 301 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A10PA6NDY2 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A18PA6NE21 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A16PA6NEW6 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 DPRXA6NFQ7 191 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 OR5H14A6NHG9 310 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A20PA6NIJ5 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A8PA6NJQ4 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A7PA6NKC0 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A22PA8MWA6 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A12PA8MX19 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A5PA8MXJ8 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A23PA8MXZ1 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 GOSR2O14653 212 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 SNAI2O43623 268 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 THBDP07204 575 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 NMBP08949 121 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A15PP0C7V4 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A13PP0C7W8 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A14PP0C7W9 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 FAM90A24PP0C7X0 464 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 PGA5P0DJD9 388 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 RAB5BP61020 215 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 RPS23P62266 143 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 IL13RA1P78552 427 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 TLE4Q04727 773 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 C2orf68Q2NKX9 166 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 Q8IYB0 196 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 C1orf174Q8IYL3 243 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 OR2T35Q8NGX2 323 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 PERPQ96FX8 193 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 WFIKKN1Q96NZ8 548 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 DLL4Q9NR61 685 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 NECAP2Q9NVZ3 263 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 C1orf123Q9NWV4 160 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 METTL1Q9UBP6 276 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 SPTBN1Q01082 2364 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 SHANK1Q9Y566 2161 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 OR2H2O95918 312 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 NFYAP23511 347 aaPredicted RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 SEC61A1P61619 476 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 IL13RA2Q14627 380 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 ATXN7L3Q14CW9 347 aaPredicted RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 GUK1Q16774 197 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 TMEM249Q2WGJ8 235 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 AADACL3Q5VUY0 350 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 WDR82Q6UXN9 313 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 TMEM144Q7Z5S9 345 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 ZDHHC22Q8N966 263 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 OR2AK2Q8NG84 335 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 OR2V2Q96R30 315 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 ALKBH7Q9BT30 221 aaPredicted RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 RHOFQ9HBH0 211 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 RCC2Q9P258 522 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 ANKHD1Q8IWZ3 2542 aaKnown RBP6.5□□□□□ -1.37
SOX6-211ENST00000528429 CACNA1BQ00975 2339 aa6.5□□□□□ -1.37
SOX6-211ENST00000528429 TRAV25A0A0B4J276 109 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 M0QXV9 152 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 RCC1P18754 421 aaPredicted RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 GRNP28799 593 aaKnown RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 CD34P28906 385 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 FCGR2CP31995 323 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 ERVK11-1P61568 191 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 ATP6V1FQ16864 119 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 C3orf36Q3SXR2 165 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 SPRNQ5BIV9 151 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 ERASQ7Z444 233 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 C11orf53Q8IXP5 236 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 EIF4E3Q8N5X7 224 aaKnown RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 UBALD1Q8TB05 177 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 LRRC29Q8WV35 223 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 C5orf66Q9H5L9 145 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 DNAJC4Q9NNZ3 241 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 RBM7Q9Y580 266 aaKnown RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 NKX6-3A6NJ46 265 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 SH2D1BO14796 132 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 HAND1O96004 215 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 PAX1P15863 534 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 FPR2P25090 351 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 CHRNB4P30926 498 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 ARL3P36405 182 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 GLP1RP43220 463 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 ASCL1P50553 236 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 RPL19P84098 196 aaKnown RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 RBM39Q14498 530 aaKnown RBP6.49□□□□□ -1.37
SOX6-211ENST00000528429 LYG2Q86SG7 212 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 LINC00596Q86U02 117 aa6.49□□□□□ -1.37
SOX6-211ENST00000528429 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms