RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 LRRC75BQ2VPJ9 315 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 FAM78BQ5VT40 261 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 MRPL14Q6P1L8 145 aaKnown RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 MRGPRGQ86SM5 289 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 CPT1CQ8TCG5 803 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 TAF15Q92804 592 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 CELA3AP09093 270 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 NPPCP23582 126 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 G6PCP35575 357 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 C3AR1Q16581 482 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 DEPPQ9NTK1 212 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 DVL1O14640 695 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 SLC10A1Q14973 349 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 TRIM61Q5EBN2 209 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
CAPN1-202ENST00000524773 LY6G6EA0A0G2JKS1 128 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 GYPAP02724 150 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 CA6P23280 308 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CAPN1-202ENST00000524773 FOXO1Q12778 655 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 MRPL37Q9BZE1 423 aaKnown RBP11.14□□□□□ -0.63
CAPN1-202ENST00000524773 U3KQA8 63 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 LAMA5O15230 3695 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 KIR2DS1A0A191URI9 304 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 K7ESF4 209 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 CBR3O75828 277 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 KLF7O75840 302 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-202ENST00000524773 FGF5P12034 268 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 OTX2P32243 289 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF114Q8NC26 417 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 DNASE2BQ8WZ79 361 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 IL22RA2Q969J5 263 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 SDSLQ96GA7 329 aa11.14□□□□□ -0.63
CAPN1-202ENST00000524773 MKRN2OSH3BPM6 223 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 KBTBD11O94819 623 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 MPLP40238 635 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 IMMP1LQ96LU5 166 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 NEU1Q99519 415 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 MSL2Q9HCI7 577 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 ZDBF2Q9HCK1 2354 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TRAV38-1A0A0B4J264 116 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
CAPN1-202ENST00000524773 GDF1P27539 372 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 GCH1P30793 250 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 SPCS3P61009 180 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 BATFQ16520 125 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 SPINK14Q6IE38 97 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 CYP2G1PQ6ZSU1 146 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TUSC5Q8IXB3 177 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 OR10G9Q8NGN4 311 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 OR10G7Q8NGN6 311 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 C1QTNF5Q9BXJ0 243 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 HES7Q9BYE0 225 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 DLL3Q9NYJ7 618 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 IL17BQ9UHF5 180 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 DPPA3Q6W0C5 159 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 RAB24Q969Q5 203 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
CAPN1-202ENST00000524773 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
CAPN1-202ENST00000524773 KIAA1549Q9HCM3 1950 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 CYC1P08574 325 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZNF25P17030 456 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 CEACAM6P40199 344 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ATP5G3P48201 142 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 THBS3P49746 956 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 KRTAP27-1Q3LI81 207 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 ZG16O60844 167 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
CAPN1-202ENST00000524773 PAX1P15863 534 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 PSMB3P49720 205 aa11.12□□□□□ -0.63
CAPN1-202ENST00000524773 HBG1P69891 147 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms