RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 TRAV14DV4A0A0A6YYC5 116 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 RGS11O94810 467 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 IFNA21P01568 189 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 GPR6P46095 362 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 TMEM33P57088 247 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 TMEM155Q4W5P6 130 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 ZNF695Q8IW36 515 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 LRTM2Q8N967 370 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 PPP1R1CQ8WVI7 109 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 NEIL1Q96FI4 390 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 LPAR3Q9UBY5 353 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 MIOXQ9UGB7 285 aa12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 UTP20O75691 2785 aaKnown RBP12.71□□□□□ -0.37
CTNNA1-236ENST00000522792 WNT2P09544 360 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 UCP1P25874 307 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 GPR12P47775 334 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 OR2B11Q5JQS5 317 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 SELENOHQ8IZQ5 122 aaKnown RBP12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF525Q8N782 197 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 ABHD14AQ9BUJ0 271 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 COMMD9Q9P000 198 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
CTNNA1-236ENST00000522792 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 FXYD6-FXYD2A0A087WZ82 144 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 LINC00205P59089 165 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 RPL30P62888 115 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 SRPXP78539 464 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 IAH1Q2TAA2 248 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 C17orf50Q8WW18 174 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 C2orf50Q96LR7 162 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 TMEM56Q96MV1 263 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 TMEM56-RWDD3S4R434 201 aa12.7□□□□□ -0.38
CTNNA1-236ENST00000522792 YLPM1P49750 1951 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 CDS2O95674 445 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 SERPINE2P07093 398 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 COL8A1P27658 744 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 EIF4EBP1Q13541 118 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 WDR25Q64LD2 544 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 NMES1Q9C002 83 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 LIN7CQ9NUP9 197 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNRD1Q9P1U0 126 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 TRBV23-1A0A0A0MS06 115 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 RNF212BA8MTL3 300 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 PLA2G2AP14555 144 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF439Q8NDP4 499 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 NRGNQ92686 78 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
CTNNA1-236ENST00000522792 PROP1O75360 226 aa12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 DLX6P56179 175 aa12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 GNB2P62879 340 aa12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 CYCSP99999 105 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-236ENST00000522792 LINC00473A8K010 186 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 M0R1X1 148 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 ARPC5O15511 151 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 MPC2O95563 127 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 RAB7AP51149 207 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 FGL1Q08830 312 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 MSMO1Q15800 293 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF585BQ52M93 769 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 LYG1Q8N1E2 194 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 OR10A7Q8NGE5 316 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 TMED3Q9Y3Q3 217 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 RAMP3O60896 148 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 SCGB1D2O95969 90 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 IGKV1-39P01597 117 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 IGKV1D-39P04432 117 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 PSMB6P28072 239 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 SSTR2P30874 369 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 S100A10P60903 97 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 CATR1Q13166 79 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 RAB32Q13637 225 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 C1orf229Q6ZS94 237 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 FOXRED2Q8IWF2 684 aa12.67□□□□□ -0.38
CTNNA1-236ENST00000522792 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 PPIAL4CA0A0B4J2A2 164 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 CLEC18AA5D8T8 446 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 C17orf98A8MV24 154 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 ITGB1BP1O14713 200 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 GPR37O15354 613 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 B3GALNT1O75752 331 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms