RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 TMEM161BQ8NDZ6 487 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 MAL2Q969L2 176 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 EBNA1BP2Q99848 306 aaKnown RBP2.31□□□□□ -2.04
PTPN12-214ENST00000520947 MED18Q9BUE0 208 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 MED28Q9H204 178 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 C11orf49Q9H6J7 331 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 HES4Q9HCC6 221 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 EMC3Q9P0I2 261 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 DKKL1Q9UK85 242 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 ALG5Q9Y673 324 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 CACNA1DQ01668 2161 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 EVC2Q86UK5 1308 aa2.31□□□□□ -2.04
PTPN12-214ENST00000520947 TRAV8-1A0A0A6YYK1 113 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 A0A1W2PQL4 384 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-214ENST00000520947 LYPLA2O95372 231 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 ORM2P19652 201 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 CCR7P32248 378 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 EVI2BP34910 448 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 KLF3P57682 345 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-214ENST00000520947 AP3S2P59780 193 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 RPS24P62847 133 aaKnown RBP2.3□□□□□ -2.04
PTPN12-214ENST00000520947 CCL7P80098 99 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 HPCAP84074 193 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 BATFQ16520 125 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 MAPK14Q16539 360 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 AKIRIN2Q53H80 203 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 MESTQ5EB52 335 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 TMEM31Q5JXX7 168 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 EBLN2Q6P2I7 272 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 DOLPP1Q86YN1 238 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 TRAPPC5Q8IUR0 188 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 TMEM75Q8N9X5 138 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 SLC35G5Q96KT7 338 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 GNB1LQ9BYB4 327 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 GABARAPL1Q9H0R8 117 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 FIS1Q9Y3D6 152 aa2.3□□□□□ -2.04
PTPN12-214ENST00000520947 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 TRAPPC3O43617 180 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 IGLV6-57P01721 117 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 IFNA6P05013 189 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 GUSBP08236 651 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 S100A5P33763 92 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 HSPA9P38646 679 aaKnown RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 SULT1A1P50225 295 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 IDH3GP51553 393 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 RAB5BP61020 215 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 NAA20P61599 178 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 HLA-DRB3P79483 266 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 BASP1P80723 227 aaKnown RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 EMX1Q04741 257 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 TMEM267Q0VDI3 215 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 OR2F1Q13607 317 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 SLC9A3R2Q15599 337 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 TAF9Q16594 264 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 HES3Q5TGS1 186 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ZNF660Q6AZW8 331 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 WDR59Q6PJI9 974 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ATP5L2Q7Z4Y8 100 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 NIT1Q86X76 327 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 GID4Q8IVV7 300 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 YIPF7Q8N8F6 280 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 Q8WTZ3 238 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ASB17Q8WXJ9 295 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 OTUB2Q96DC9 234 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 IMP4Q96G21 291 aaKnown RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 TM2D3Q9BRN9 247 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 OR51I2Q9H344 312 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 XPNPEP1Q9NQW7 623 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 SLC2A9Q9NRM0 540 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ZNF586Q9NXT0 402 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 DNAJC12Q9UKB3 198 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 LSM5Q9Y4Y9 91 aaKnown RBP2.29□□□□□ -2.04
PTPN12-214ENST00000520947 SDK2Q58EX2 2172 aa2.29□□□□□ -2.04
PTPN12-214ENST00000520947 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 A8MWP4 228 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 DISC1C4P0D8 188 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 H3BQ85 93 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 STK16O75716 305 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 KRT75O95678 551 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 IGKV1D-33P01593 117 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 IGKV1-33P01594 117 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 IGLV3-27P01718 113 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 TRGV3P03979 118 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 CGB3P0DN86 165 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 CGB7P0DN87 165 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 CDK2P24941 298 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 GABRA3P34903 492 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 TCL1AP56279 114 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 RSU1Q15404 277 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 FAM78BQ5VT40 261 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 OR10K2Q6IF99 312 aa2.28□□□□□ -2.04
PTPN12-214ENST00000520947 Q6ZQT7 251 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms