RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 SMR3AQ99954 134 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 C11orf54Q9H0W9 315 aaPredicted RBP11.51□□□□□ -0.57
SDC2-203ENST00000519587 HRASLSQ9HDD0 168 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 PIPOXQ9P0Z9 390 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 NUP50Q9UKX7 468 aa11.51□□□□□ -0.57
SDC2-203ENST00000519587 LINC00854A0A1B0GVQ3 168 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 LEUTXA8MZ59 168 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 RAB29O14966 203 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 TXNL1O43396 289 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 FSHBP01225 129 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR8U9P0C7N5 309 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 S100GP29377 79 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 SAA4P35542 130 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 GPR12P47775 334 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 FXYD4P59646 89 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 SCGB2B2Q4G0G5 96 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 CT45A1Q5HYN5 189 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 FAM71F2Q6NXP2 309 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 LPCAT3Q6P1A2 487 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
SDC2-203ENST00000519587 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR8U1Q8NH10 309 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR56B4Q8NH76 319 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 CT45A3Q8NHU0 189 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 RPEQ96AT9 228 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 S1PR3Q99500 378 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 SLC6A7Q99884 636 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 MS4A7Q9GZW8 240 aaPredicted RBP11.5□□□□□ -0.57
SDC2-203ENST00000519587 PARP12Q9H0J9 701 aaKnown RBP11.5□□□□□ -0.57
SDC2-203ENST00000519587 OR2D2Q9H210 308 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 IFI27L2Q9H2X8 130 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 SLC2A8Q9NY64 477 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 FAM96BQ9Y3D0 163 aa11.5□□□□□ -0.57
SDC2-203ENST00000519587 IGHV3OR16-10A0A075B7F0 116 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 A0A1W2PPE3 182 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 A0A1W2PRD5 423 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 A0A1W2PRF3 423 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 A0A1W2PRM7 423 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 OOSP1A8MZH6 123 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SLC31A2O15432 143 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 EPHA1P21709 976 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 ZNF137PP52743 207 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 MSMO1Q15800 293 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 PLA1AQ53H76 456 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
SDC2-203ENST00000519587 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
SDC2-203ENST00000519587 CCDC144NLQ6NUI1 221 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 FAAP20Q6NZ36 180 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
SDC2-203ENST00000519587 OR51S1Q8NGJ8 323 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 TOMM40LQ969M1 308 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SCGB3A2Q96PL1 93 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 BEX2Q9BXY8 128 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
SDC2-203ENST00000519587 SAA2-SAA4A0A096LPE2 208 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 HSD17B6O14756 317 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 LYRM1O43325 122 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 SAA2P0DJI9 122 aaPredicted RBP11.48□□□□□ -0.57
SDC2-203ENST00000519587 PGAM2P15259 253 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 ZNF134P52741 427 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 ASAH1Q13510 395 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 DCTN2Q13561 401 aaKnown RBP11.48□□□□□ -0.57
SDC2-203ENST00000519587 SURF2Q15527 256 aaPredicted RBP11.48□□□□□ -0.57
SDC2-203ENST00000519587 UTF1Q5T230 341 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
SDC2-203ENST00000519587 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 IDO2Q6ZQW0 420 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 MALSU1Q96EH3 234 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 AGMATQ9BSE5 352 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 FXYD6Q9H0Q3 95 aa11.48□□□□□ -0.57
SDC2-203ENST00000519587 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 GAPDHP04406 335 aaKnown RBP11.47□□□□□ -0.57
SDC2-203ENST00000519587 FBP1P09467 338 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 UCP3P55916 312 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 LHFPL1Q86WI0 220 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
SDC2-203ENST00000519587 ZFAND1Q8TCF1 268 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms