RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	CD5	P06127	495 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362		P0C879	139 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	GZMH	P20718	246 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	DYNLT3	P51808	116 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	ARHGDIB	P52566	201 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	BRWD1-AS2	P59051	145 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	SELENOV	P59797	346 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	DEFA5	Q01523	94 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	EDDM3A	Q14507	147 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	SNRNP40	Q96DI7	357 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	ESRP2	Q9H6T0	727 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	GCM1	Q9NP62	436 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	MSRB2	Q9Y3D2	182 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	MMP24	Q9Y5R2	645 aa		10.31	□□□□□ -0.76
SPIDR-210	ENST00000519362	SYNGR2	O43760	224 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	PTAFR	P25105	342 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	ATP6V0C	P27449	155 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	FHIT	P49789	147 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	RPL23A	P62750	156 aa	Known RBP	10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	CATR1	Q13166	79 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TMEM108	Q6UXF1	575 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TCTEX1D1	Q8N7M0	179 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	RFESD	Q8TAC1	157 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	NCOR1P1	Q9H4R4	102 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TMEM231	Q9H6L2	316 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TREM1	Q9NP99	234 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	FAM96B	Q9Y3D0	163 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	STRAP	Q9Y3F4	350 aa	Known RBP	10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	IGHV3-43	A0A0B4J1X8	118 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	FAM157A	C9JC47	383 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	FAM90A26	D6RGX4	464 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	RNASEK-C17orf49	H0YIS7	233 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TRIM77	I1YAP6	450 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TOR1A	O14656	332 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	THBD	P07204	575 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	IGHV3-43D	P0DP04	118 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	SULT1A1	P50225	295 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TNFAIP6	P98066	277 aa	Predicted RBP	10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	ZNF273	Q14593	569 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	PRR30	Q53SZ7	412 aa	Predicted RBP	10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	ZNF66	Q6ZN08	573 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	STX12	Q86Y82	276 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	SVBP	Q8N300	66 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	COMMD1	Q8N668	190 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	TMEM217	Q8N7C4	229 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	ZNRF1	Q8ND25	227 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362		Q8TCH9	128 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	FAM216A	Q8WUB2	273 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	SEC11C	Q9BY50	192 aa		10.3	□□□□□ -0.76
SPIDR-210	ENST00000519362	APC2	O95996	2303 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	CACNA1A	O00555	2505 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	MEX3A	A1L020	520 aa	Known RBP	10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362		F8W036	122 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	F2RL2	O00254	374 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	C1QL1	O75973	258 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	SNCA	P37840	140 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	CAMLG	P49069	296 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	TAS2R30	P59541	319 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	MIDN	Q504T8	468 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	SSX8	Q7RTT4	187 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	PUSL1	Q8N0Z8	303 aa	Known RBP	10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	EDARADD	Q8WWZ3	215 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	ATP5S	Q99766	215 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	SCRT1	Q9BWW7	348 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	NKX6-2	Q9C056	277 aa	Predicted RBP	10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	C19orf12	Q9NSK7	152 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	RNF7	Q9UBF6	113 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	JPT1	Q9UK76	154 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	CAD	P27708	2225 aa		10.29	□□□□□ -0.76
SPIDR-210	ENST00000519362	DPRX	A6NFQ7	191 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	C17orf98	A8MV24	154 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	UMAD1	C9J7I0	102 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362		H3BP45	60 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	DNASE2	O00115	360 aa	Predicted RBP	10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	AGPAT2	O15120	278 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	ST8SIA5	O15466	376 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	YPEL1	O60688	119 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	CLDN1	O95832	211 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	TSPAN15	O95858	294 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	CGB3	P0DN86	165 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	CGB7	P0DN87	165 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	DVL1P1	P54792	670 aa	Predicted RBP	10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	LOXL3	P58215	753 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	GUCA2B	Q16661	112 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	MORN2	Q502X0	79 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	FAM201A	Q5SY85	155 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	STUM	Q69YW2	141 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	BTNL3	Q6UXE8	466 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	ZNF561	Q8N587	486 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	TCTEX1D2	Q8WW35	142 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	SDSL	Q96GA7	329 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	YPEL2	Q96QA6	119 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	HSD17B10	Q99714	261 aa	Known RBP	10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	SH3BGRL2	Q9UJC5	107 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	PSG11	Q9UQ72	335 aa		10.28	□□□□□ -0.76
SPIDR-210	ENST00000519362	RFNG	Q9Y644	331 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms