RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 IGSF11Q5DX21 431 aa10.52□□□□□ -0.73
VEGFA-219ENST00000518824 CENPVQ7Z7K6 275 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-219ENST00000518824 ZNF329Q86UD4 541 aa10.52□□□□□ -0.73
VEGFA-219ENST00000518824 OR2AK2Q8NG84 335 aa10.52□□□□□ -0.73
VEGFA-219ENST00000518824 OR2T10Q8NGZ9 312 aa10.52□□□□□ -0.73
VEGFA-219ENST00000518824 HSPB9Q9BQS6 159 aa10.52□□□□□ -0.73
VEGFA-219ENST00000518824 TRIM64CA6NLI5 447 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 TRDCB7Z8K6 153 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 M0QZK8 103 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 FGF16O43320 207 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 IDNKQ5T6J7 187 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 TPRA1Q86W33 373 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 DTX3Q8N9I9 347 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 SLC25A38Q96DW6 304 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 S1PR3Q99500 378 aa10.51□□□□□ -0.73
VEGFA-219ENST00000518824 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 A0A087WXM4 84 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 FABP7O15540 132 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 TXNL1O43396 289 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 RGS11O94810 467 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 TNFAIP8O95379 198 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 IGHG2P01859 326 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 SMIM18P0DKX4 95 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 CDNFQ49AH0 187 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 C18orf65Q6ZTR6 163 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 FAM71E2Q8N5Q1 922 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 DRAXINQ8NBI3 349 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-219ENST00000518824 PTX4Q96A99 478 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 RDH8Q9NYR8 311 aa10.5□□□□□ -0.73
VEGFA-219ENST00000518824 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 METTL21EPA6NDL7 271 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 TMEM235A6NFC5 223 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 SERPINE3A8MV23 424 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 BET1O15155 118 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 HSPA12AO43301 675 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 WIPF1O43516 503 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 SSX5O60225 188 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 ZBTB25P24278 435 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 GPR12P47775 334 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 ACTBP60709 375 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 ARFRP1Q13795 201 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 ZNF260Q3ZCT1 412 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 FAM131AQ6UXB0 335 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 LCNL1Q6ZST4 164 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 NUDCD2Q8WVJ2 157 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 CABLES2Q9BTV7 478 aa10.49□□□□□ -0.73
VEGFA-219ENST00000518824 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 H0YJW9 148 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 ITGB1BP1O14713 200 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 RAB29O14966 203 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 AIREO43918 545 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 PTHLHP12272 177 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 RPS19P39019 145 aaKnown RBP10.48□□□□□ -0.73
VEGFA-219ENST00000518824 STPG2Q8N412 459 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 OR4A4PQ8NGN8 299 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 R3HDM4Q96D70 268 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.48□□□□□ -0.739e-6■□□□□ 9.4
VEGFA-219ENST00000518824 LIN7CQ9NUP9 197 aaKnown RBP10.48□□□□□ -0.73
VEGFA-219ENST00000518824 RHBDL2Q9NX52 303 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 PIPOXQ9P0Z9 390 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 ZNF107Q9UII5 783 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-219ENST00000518824 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
VEGFA-219ENST00000518824 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 G3V4G9 280 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 OPN1MWP04001 364 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 OR8U9P0C7N5 309 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 OPN1MW2P0DN77 364 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 OPN1MW3P0DN78 364 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 RANBP1P43487 201 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 NCS1P62166 190 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 DEFA6Q01524 100 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 MMDQ15546 238 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 OR8U1Q8NH10 309 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 RASL11BQ9BPW5 248 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
VEGFA-219ENST00000518824 TOLLIPQ9H0E2 274 aa10.47□□□□□ -0.73
VEGFA-219ENST00000518824 NOTCH1P46531 2555 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 J3QRK9 145 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 FCER2P06734 321 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
VEGFA-219ENST00000518824 NDPQ00604 133 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 KHDC1LQ5JSQ8 128 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 HACD4Q5VWC8 232 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 FAM71F2Q6NXP2 309 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 EDARADDQ8WWZ3 215 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 ST6GALNAC5Q9BVH7 336 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 FUNDC2Q9BWH2 189 aa10.46□□□□□ -0.73
VEGFA-219ENST00000518824 TRAV18A0A075B6X5 111 aa10.45□□□□□ -0.74
VEGFA-219ENST00000518824 IGHV7-81A0A0B4J1V7 117 aa10.45□□□□□ -0.74
VEGFA-219ENST00000518824 FCN1O00602 326 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms