RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 LGALS1P09382 135 aaKnown RBP4.62□□□□□ -1.67
CCDC6-203ENST00000518638 IL3RAP26951 378 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 GSSP48637 474 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 RAB9AP51151 201 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 CRMP1Q14194 572 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF146Q15072 292 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF829Q3KNS6 432 aaPredicted RBP4.62□□□□□ -1.67
CCDC6-203ENST00000518638 KIAA2026Q5HYC2 2103 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 TMEM42Q69YG0 159 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 PYHIN1Q6K0P9 492 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 DEGS2Q6QHC5 323 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 SIGLEC15Q6ZMC9 328 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 ASRGL1Q7L266 308 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 TRPM8Q7Z2W7 1104 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 Q8N402 240 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 LINC00471Q8N535 108 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF565Q8N9K5 539 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 Q8N9W7 124 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 THAP8Q8NA92 274 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 MINDY2Q8NBR6 621 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 OR10A7Q8NGE5 316 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 OTOSQ8NHW6 89 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 GNPDA2Q8TDQ7 276 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 S1PR3Q99500 378 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 TPPP3Q9BW30 176 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 C1QTNF4Q9BXJ3 329 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 BARHL1Q9BZE3 327 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 NMNAT2Q9BZQ4 307 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 CHST6Q9GZX3 395 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 TOLLIPQ9H0E2 274 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 MOB1AQ9H8S9 216 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 GSN-AS1Q9NRJ2 163 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 IL20Q9NYY1 176 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF107Q9UII5 783 aaPredicted RBP4.62□□□□□ -1.67
CCDC6-203ENST00000518638 SAMD4AQ9UPU9 718 aaKnown RBP4.62□□□□□ -1.67
CCDC6-203ENST00000518638 MUC4Q99102 2169 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 TNCP24821 2201 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 HECTD4Q9Y4D8 3996 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 KBTBD11-OT1A0A1B0GTJ5 212 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 TMEM269A0A1B0GVZ9 245 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 FAM230AA0A1W2PPH8 454 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 ODAMA1E959 279 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 F8VVB4 439 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 F8VWA3 439 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 HSD17B6O14756 317 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 SH2D1BO14796 132 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 IGLV3-1P01715 115 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 HSPB1P04792 205 aaKnown RBP4.61□□□□□ -1.67
CCDC6-203ENST00000518638 GYPBP06028 91 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 ZP3P21754 424 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 NFYBP25208 207 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CD1BP29016 333 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CD40LGP29965 261 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 NUDT2P50583 147 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 RAB40BQ12829 278 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 APOFQ13790 326 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CTF1Q16619 201 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 PAPPA-AS1Q5QFB9 102 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 LINC01590Q5TEZ4 76 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 SPSB3Q6PJ21 355 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 GPR141Q7Z602 305 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CATSPERDQ86XM0 798 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 ANGPTL5Q86XS5 388 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 Q8N6K4 173 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CHST4Q8NCG5 386 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 OR2T33Q8NG76 320 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 OR2K2Q8NGT1 345 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 OR52J3Q8NH60 311 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 THEM6Q8WUY1 208 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 ZNRF4Q8WWF5 429 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 RGP1Q92546 391 aaPredicted RBP4.61□□□□□ -1.67
CCDC6-203ENST00000518638 OR5B12Q96R08 314 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 MROQ9BYG7 248 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 CST11Q9H112 138 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 GORASP2Q9H8Y8 452 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 RHOFQ9HBH0 211 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 RETNQ9HD89 108 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 EXOSC4Q9NPD3 245 aaKnown RBP4.61□□□□□ -1.67
CCDC6-203ENST00000518638 GPR84Q9NQS5 396 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 SLC2A8Q9NY64 477 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 NUFIP1Q9UHK0 495 aaKnown RBP4.61□□□□□ -1.67
CCDC6-203ENST00000518638 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
CCDC6-203ENST00000518638 TRAV41A0A0B4J266 112 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 IGHV1-3A0A0C4DH29 117 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 TSC22D2O75157 780 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF254O75437 659 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 GMNNO75496 209 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 DEDDO75618 318 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 GATBO75879 557 aaKnown RBP4.6□□□□□ -1.67
CCDC6-203ENST00000518638 KDM4BO94953 1096 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 MT3P25713 68 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 FUT6P51993 359 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 TCTAP57738 103 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 ACTR3P61158 418 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 VSNL1P62760 191 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 AESQ08117 197 aa4.6□□□□□ -1.67
CCDC6-203ENST00000518638 MRPL28Q13084 256 aaKnown RBP4.6□□□□□ -1.67
CCDC6-203ENST00000518638 KIAA0141Q14154 515 aaPredicted RBP4.6□□□□□ -1.67
CCDC6-203ENST00000518638 MOGAT2Q3SYC2 334 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms