RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PIK3R4Q99570 1358 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 LINC00854A0A1B0GVQ3 168 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 H3BPC8 53 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 COPEO14579 308 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 ARL6IP5O75915 188 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 HBZP02008 142 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 CRYBA1P05813 215 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 OR13C7P0DN81 318 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 ESDP10768 282 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 CD36P16671 472 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 NPPCP23582 126 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 CD200P41217 278 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 TSPEAR-AS2P59090 65 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 ACTBP60709 375 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 ACTG1P63261 375 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 PMS2P3Q13401 168 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 XKRXQ6PP77 449 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 PLCZ1Q86YW0 608 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 BLIDQ8IZY5 108 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 TRNT1Q96Q11 434 aaKnown RBP1.66□□□□□ -2.14
SQLE-202ENST00000518604 Q9BRP9 147 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 TMEM208Q9BTX3 173 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 C16orf95Q9H693 158 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 CD300AQ9UGN4 299 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 NPATQ14207 1427 aa1.66□□□□□ -2.14
SQLE-202ENST00000518604 DAPL1A0PJW8 107 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 TMEM235A6NFC5 223 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 TRPC5OSA6NMA1 111 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 FNDC10F2Z333 226 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 H3BRN7 92 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 ASS1P00966 412 aaKnown RBP1.65□□□□□ -2.15
SQLE-202ENST00000518604 NPPAP01160 153 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 ORM1P02763 201 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 ADORA1P30542 326 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 HSPA9P38646 679 aaKnown RBP1.65□□□□□ -2.15
SQLE-202ENST00000518604 CRATP43155 626 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 CD151P48509 253 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 H2BFSP57053 126 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 LRRC26Q2I0M4 334 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 TBC1D28Q2M2D7 210 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 KRTAP21-3Q3LHN1 58 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 CCDC112Q8NEF3 446 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 LFNGQ8NES3 379 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 OR5L1Q8NGL2 311 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 TLCD1Q96CP7 247 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 RBP7Q96R05 134 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 ZNF426Q9BUY5 554 aa1.65□□□□□ -2.15
SQLE-202ENST00000518604 STRCP1A6NGW2 1772 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 VPS37CA5D8V6 355 aaPredicted RBP1.64□□□□□ -2.15
SQLE-202ENST00000518604 C19orf71A6NCJ1 209 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 SLC17A3O00476 420 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 PSMG1O95456 288 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 GZMBP10144 247 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 CRHBPP24387 322 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 LINC00313P59037 77 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 TAS2R45P59539 299 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 DMTNQ08495 405 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 BOD1L2Q8IYS8 172 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 OR2D3Q8NGH3 330 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 GPR22Q99680 433 aa1.64□□□□□ -2.15
SQLE-202ENST00000518604 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
SQLE-202ENST00000518604 PLXNA3P51805 1871 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 FTCDNL1E5RQL4 147 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 SMLR1H3BR10 107 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 CCRL2O00421 344 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 ZW10O43264 779 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 RD3LP0DJH9 198 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 SPATA31B1PQ5VZV4 182 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 LGALS9CQ6DKI2 356 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 OR4X1Q8NH49 305 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 DCANP1Q8TF63 244 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 MRPS24Q96EL2 167 aaKnown RBP1.63□□□□□ -2.15
SQLE-202ENST00000518604 ATP6V1G3Q96LB4 118 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 NKX6-2Q9C056 277 aaPredicted RBP1.63□□□□□ -2.15
SQLE-202ENST00000518604 NDEL1Q9GZM8 345 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 OR51B6Q9H340 312 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 CFAP45Q9UL16 551 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 GMEB1Q9Y692 573 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 RIMS2Q9UQ26 1411 aa1.63□□□□□ -2.15
SQLE-202ENST00000518604 COL11A1P12107 1806 aaPredicted RBP1.63□□□□□ -2.15
SQLE-202ENST00000518604 OTOFQ9HC10 1997 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 STX10O60499 249 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 LINC00614P0C842 121 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 BTN3A2P78410 334 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 PRDX4Q13162 271 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.62□□□□□ -2.15
SQLE-202ENST00000518604 LCN8Q6JVE9 175 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 ZNF283Q8N7M2 679 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 PECRQ9BY49 303 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 SPACA1Q9HBV2 294 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 PARVAQ9NVD7 372 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 NDUFB11Q9NX14 153 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 CACNA1SQ13698 1873 aa1.62□□□□□ -2.15
SQLE-202ENST00000518604 TRAV8-1A0A0A6YYK1 113 aa1.61□□□□□ -2.15
SQLE-202ENST00000518604 IGHV3-15A0A0B4J1V0 119 aa1.61□□□□□ -2.15
SQLE-202ENST00000518604 METTL15A6NJ78 407 aa1.61□□□□□ -2.15
SQLE-202ENST00000518604 NDUFS6O75380 124 aaKnown RBP1.61□□□□□ -2.15
SQLE-202ENST00000518604 PET100P0DJ07 73 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms