RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RNF24Q9Y225 148 aa10.92□□□□□ -0.66
SMAD1-215ENST00000515385 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
SMAD1-215ENST00000515385 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 UBE2L5PA0A1B0GUS4 154 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IAPPP10997 89 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 HOXB2P14652 356 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CLDN15P56746 228 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CLDN18P56856 261 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 FBXW4P57775 412 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 RSPO1Q2MKA7 263 aaPredicted RBP10.91□□□□□ -0.66
SMAD1-215ENST00000515385 COX19Q49B96 90 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 FFAR4Q5NUL3 377 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CADM4Q8NFZ8 388 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CPT1CQ8TCG5 803 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CEP350Q5VT06 3117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IGKV1D-13A0A0B4J2D9 117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IGHV1-69-2A0A0G2JMI3 117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IGKV1-13P0DP09 117 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 NPPCP23582 126 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 FKBP2P26885 142 aaKnown RBP10.91□□□□□ -0.66
SMAD1-215ENST00000515385 TNFRSF4P43489 277 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 BHLHA15Q7RTS1 189 aaPredicted RBP10.91□□□□□ -0.66
SMAD1-215ENST00000515385 TCF23Q7RTU1 214 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 DTX1Q86Y01 620 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 OR10V1Q8NGI7 309 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 OR10G8Q8NGN5 311 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 TMEM147Q9BVK8 224 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 IL36BQ9NZH7 164 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 CACNG5Q9UF02 275 aa10.91□□□□□ -0.66
SMAD1-215ENST00000515385 ARID1BQ8NFD5 2236 aaPredicted RBP10.9□□□□□ -0.66
SMAD1-215ENST00000515385 COL5A1P20908 1838 aaPredicted RBP10.9□□□□□ -0.66
SMAD1-215ENST00000515385 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 C9orf172C9J069 976 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 K7ERU9 68 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 NAPSAO96009 420 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 TSPOP30536 169 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 ZNF90Q03938 601 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 PMCHL1Q16048 86 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 TMEM14EPQ6UXP3 125 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 RBM24Q9BX46 236 aaKnown RBP10.9□□□□□ -0.66
SMAD1-215ENST00000515385 CHRNA10Q9GZZ6 450 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 PLA2G3Q9NZ20 509 aa10.9□□□□□ -0.66
SMAD1-215ENST00000515385 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
SMAD1-215ENST00000515385 RBM7Q9Y580 266 aaKnown RBP10.9□□□□□ -0.66
SMAD1-215ENST00000515385 C1QTNF9BB2RNN3 333 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 J3QW42 95 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 OR7C1O76099 320 aaPredicted RBP10.89□□□□□ -0.67
SMAD1-215ENST00000515385 MT-ND6P03923 174 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 PRRX1P54821 245 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 GNB1P62873 340 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 RHOGP84095 191 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 SPANXN5Q5MJ07 72 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 CST9LQ9H4G1 147 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 SOHLH2Q9NX45 425 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 PPIAL4AQ9Y536 164 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 AQP7P3A6NL99 342 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 C17orf112F2Z3M2 114 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 EFNA2O43921 213 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 SCTP09683 121 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 C1QTNF9P0C862 333 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 ACRP10323 421 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 OR1D5P58170 312 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 SNAI3Q3KNW1 292 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 UNQ5815/PRO19632Q6UWF5 114 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 Q6ZSR6 202 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 TMEM54Q969K7 222 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 GNB1LQ9BYB4 327 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 TBL2Q9Y4P3 447 aaKnown RBP10.89□□□□□ -0.67
SMAD1-215ENST00000515385 HS3ST3A1Q9Y663 406 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 ATP23Q9Y6H3 246 aa10.89□□□□□ -0.67
SMAD1-215ENST00000515385 FCN1O00602 326 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 PSG2P11465 335 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 CBLN1P23435 193 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 TIMP3P35625 211 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 KIR2DL1P43626 348 aaPredicted RBP10.88□□□□□ -0.67
SMAD1-215ENST00000515385 RHBDD2Q6NTF9 364 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 Q6ZRM9 215 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 SFTPA2Q8IWL1 248 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 THAP3Q8WTV1 239 aaPredicted RBP10.88□□□□□ -0.67
SMAD1-215ENST00000515385 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 DPRXA6NFQ7 191 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 RAB1CQ92928 201 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 OR6C1Q96RD1 312 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 LRFN3Q9BTN0 628 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 OR2W1Q9Y3N9 320 aa10.88□□□□□ -0.67
SMAD1-215ENST00000515385 IGLV3-32A0A0A0MS00 114 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 IGLC7A0M8Q6 106 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms