RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 IGLV3-1P01715 115 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 SELEP16581 610 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 PMCHP20382 165 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 BCL3P20749 454 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 MPLP40238 635 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 RND2P52198 227 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 ZNF90Q03938 601 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 DCAF12Q5T6F0 453 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 LRTM2Q8N967 370 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 ZNF488Q96MN9 340 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 CDX2Q99626 313 aaPredicted RBP8.23□□□□□ -1.09
VCAN-210ENST00000513960 CDH20Q9HBT6 801 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 MANBALQ9NQG1 85 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 SLC22A20A6NK97 555 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 KBTBD11O94819 623 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 KITLGP21583 273 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 LMO1P25800 156 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 OTX1P32242 354 aaPredicted RBP8.23□□□□□ -1.09
VCAN-210ENST00000513960 RSPO1Q2MKA7 263 aaPredicted RBP8.23□□□□□ -1.09
VCAN-210ENST00000513960 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 ZNF808Q8N4W9 903 aaPredicted RBP8.23□□□□□ -1.09
VCAN-210ENST00000513960 OR1F12Q8NHA8 337 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 SGMS2Q8NHU3 365 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 TMEM170AQ8WVE7 144 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 FOXJ2Q9P0K8 574 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 DUXBA0A1W2PPF3 345 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 KRASP01116 189 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 RBM11P57052 281 aaKnown RBP8.23□□□□□ -1.09
VCAN-210ENST00000513960 ZNF726P1Q15940 193 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 MKXQ8IYA7 352 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 OR51G1Q8NGK1 321 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 DNAJC4Q9NNZ3 241 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 TMEM9BQ9NQ34 198 aa8.23□□□□□ -1.09
VCAN-210ENST00000513960 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 NTF3P20783 257 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 GCH1P30793 250 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 TPPP2P59282 170 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 TMEM183BQ1AE95 376 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 CYP2G1PQ6ZSU1 146 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 B4E171 279 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 IL18BPO95998 194 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 GDF1P27539 372 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 TSPAN7P41732 249 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 FUT6P51993 359 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 ZNF816Q0VGE8 651 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 NEIL1Q96FI4 390 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 SH2D2AQ9NP31 389 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 TMEM38BQ9NVV0 291 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 A0A096LPE4 126 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 KIR2DS1A0A191URI9 304 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 FOXI3A8MTJ6 420 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 F6UZH7 168 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 CA11O75493 328 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 PGLYRP1O75594 196 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 CD82P27701 267 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 KIR2DS4P43632 304 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 ARL16Q0P5N6 197 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 KIR2DS1Q14954 304 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 WIPI1Q5MNZ9 446 aaPredicted RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 MRPL21Q7Z2W9 205 aaKnown RBP8.22□□□□□ -1.09
VCAN-210ENST00000513960 CPT1CQ8TCG5 803 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 FOXB1Q99853 325 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 OR6C3Q9NZP0 311 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 TCFL5Q9UL49 500 aa8.22□□□□□ -1.09
VCAN-210ENST00000513960 LOC102724200A0A096LPH7 203 aaPredicted RBP8.21□□□□□ -1.09
VCAN-210ENST00000513960 SIRPB1O00241 398 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.09
VCAN-210ENST00000513960 CBLN1P23435 193 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 IL3RAP26951 378 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 EDDM3BP56851 147 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 PCBD1P61457 104 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 HTD2P86397 168 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 ID3Q02535 119 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 LPAL2Q16609 132 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 CEACAM16Q2WEN9 425 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 OR56B2PQ8NGI1 322 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 PINX1Q96BK5 328 aaKnown RBP8.21□□□□□ -1.09
VCAN-210ENST00000513960 A0A0G2JMM0 328 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 A0A1W2PPB8 328 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 A0A1W2PRS3 328 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 C20orf202A1L168 122 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 CBY3A6NI87 242 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 KIR3DP1A8MWS1 328 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 M0QZK8 103 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 GGCTO75223 188 aaKnown RBP8.21□□□□□ -1.09
VCAN-210ENST00000513960 NDUFB4O95168 129 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 F2RP25116 425 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 CYB561P49447 251 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 RELQ04864 619 aaPredicted RBP8.21□□□□□ -1.09
VCAN-210ENST00000513960 DNLZQ5SXM8 178 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 TMEM211Q6ICI0 200 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 ERASQ7Z444 233 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 GBGT1Q8N5D6 347 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 OR10D3Q8NH80 312 aa8.21□□□□□ -1.09
VCAN-210ENST00000513960 CIB3Q96Q77 187 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms