RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 LINC00596Q86U02 117 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 GCSAMQ8N6F7 178 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 LINC01560Q8TB33 94 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 TRAV30A0A087WSZ9 112 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 MED19A0JLT2 244 aaPredicted RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 CDKN2AP42771 156 aaKnown RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 TNFSF10P50591 281 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 SUCLG1P53597 346 aaKnown RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 BSXQ3C1V8 233 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 DNM1P46Q6ZS02 220 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 TMEM183AQ8IXX5 376 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 OR2T10Q8NGZ9 312 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 MRGPRFQ96AM1 343 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 DDA1Q9BW61 102 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 SOX21Q9Y651 276 aaPredicted RBP5.03□□□□□ -1.6
USP38-203ENST00000511739 CASP8AP2Q9UKL3 1982 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 NTN1O95631 604 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 CXorf1O96002 111 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 NMUP48645 174 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 DLX6P56179 175 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 TGIF1Q15583 401 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 TMEM255AQ5JRV8 349 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 BPIFA4PQ86YQ2 179 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 WNT2BQ93097 391 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 COX14Q96I36 57 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 ABHD14BQ96IU4 210 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 GPR82Q96P67 336 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 IL20Q9NYY1 176 aa5.03□□□□□ -1.6
USP38-203ENST00000511739 C17orf51A8MQB3 221 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TRGV3P03979 118 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PPP1R1AQ13522 171 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 FAM209BQ5JX69 171 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CFAP161Q6P656 301 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 LINC01555Q8NAE3 123 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 NEU1Q99519 415 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 HSPB7Q9UBY9 170 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ZFP30Q9Y2G7 519 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 OR2W1Q9Y3N9 320 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 LMX1BO60663 402 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CEACAM4O75871 244 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CTSDP07339 412 aaPredicted RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 CKS2P33552 79 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 DRD3P35462 400 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CTF1Q16619 201 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 SLC35E3Q7Z769 313 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ALKBH7Q9BT30 221 aaPredicted RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 SLC35B3Q9H1N7 401 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 LOC107984156A0A0G2JMH3 177 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 IGHV1-69-2A0A0G2JMI3 117 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 C9orf170A2RU37 121 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 C9JCJ5 164 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ZFPL1O95159 310 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 HPRT1P00492 218 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 SNRPCP09234 159 aaKnown RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 CT62P0C5K7 136 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PGA4P0DJD7 388 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PGA5P0DJD9 388 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 NAT2P11245 290 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 CLDN20P56880 219 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TSPO2Q5TGU0 170 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ARL17AQ8IVW1 177 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TPRX1Q8N7U7 411 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 NUDT10Q8NFP7 164 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ANAPC16Q96DE5 110 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TOLLIPQ9H0E2 274 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 SPTA1P02549 2419 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PDCD11Q14690 1871 aaKnown RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 B9A039 149 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 SYNGR3O43761 229 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 NDUFB6O95139 128 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PPYP01298 95 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 APCSP02743 223 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TDGF1P13385 188 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 ANOS1P23352 680 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PSG6Q00889 435 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 HIST1H1AQ02539 215 aaPredicted RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 SFXN3Q9BWM7 321 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 IL19Q9UHD0 177 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 MPV17P39210 176 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 HMGA2P52926 109 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 MSRB3Q8IXL7 192 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 PRELID3AQ96N28 172 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 KIR2DL4Q99706 377 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 GPR61Q9BZJ8 451 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 TLNRD1Q9H1K6 362 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 C7orf69Q9H7B7 122 aa5.02□□□□□ -1.61
USP38-203ENST00000511739 RALYQ9UKM9 306 aaKnown RBP5.02□□□□□ -1.61
USP38-203ENST00000511739 TRBV5-3A0A0A0MS03 114 aa5.01□□□□□ -1.61
USP38-203ENST00000511739 PDE6DO43924 150 aa5.01□□□□□ -1.61
USP38-203ENST00000511739 HBZP02008 142 aa5.01□□□□□ -1.61
USP38-203ENST00000511739 MALP21145 153 aa5.01□□□□□ -1.61
USP38-203ENST00000511739 COMPP49747 757 aaPredicted RBP5.01□□□□□ -1.61
USP38-203ENST00000511739 TCTAP57738 103 aa5.01□□□□□ -1.61
USP38-203ENST00000511739 RPL8P62917 257 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms