RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SLC23A1Q9UHI7 598 aa14.05□□□□□ -0.16
TPM3-220ENST00000509601 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
TPM3-220ENST00000509601 ITGB1BP1O14713 200 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 PROP1O75360 226 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 DUS4LO95620 317 aaKnown RBP14.04□□□□□ -0.16
TPM3-220ENST00000509601 IGHG4P01861 327 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 SCTP09683 121 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 SLC2A2P11168 524 aaPredicted RBP14.04□□□□□ -0.16
TPM3-220ENST00000509601 CEACAM6P40199 344 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 FOXE3Q13461 319 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 MMDQ15546 238 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 RPL39P5Q59GN2 51 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 ZNF367Q7RTV3 350 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 NPBQ8NG41 125 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 RAX2Q96IS3 184 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 ABHD14BQ96IU4 210 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 DUX3Q96PT4 197 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 C11orf54Q9H0W9 315 aaPredicted RBP14.04□□□□□ -0.16
TPM3-220ENST00000509601 PIPOXQ9P0Z9 390 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 ZNF107Q9UII5 783 aaPredicted RBP14.04□□□□□ -0.16
TPM3-220ENST00000509601 RAB26Q9ULW5 256 aa14.04□□□□□ -0.16
TPM3-220ENST00000509601 TMEM272A0A1B0GTI8 110 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 NUDT19A8MXV4 375 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 K7EIL1 84 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 RAB29O14966 203 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 PPIFP30405 207 aaKnown RBP14.03□□□□□ -0.16
TPM3-220ENST00000509601 CDX1P47902 265 aaPredicted RBP14.03□□□□□ -0.16
TPM3-220ENST00000509601 PSMD7P51665 324 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 EGFEM1PQ0D2K5 195 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 KIAA0141Q14154 515 aaPredicted RBP14.03□□□□□ -0.16
TPM3-220ENST00000509601 KIR2DS1Q14954 304 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 HES5Q5TA89 166 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 FAM71F2Q6NXP2 309 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 CD200R1LQ6Q8B3 271 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 MOB1BQ7L9L4 216 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 KCTD7Q96MP8 289 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 OR1A1Q9P1Q5 309 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 KCNK7Q9Y2U2 307 aa14.03□□□□□ -0.16
TPM3-220ENST00000509601 IGHV7-81A0A0B4J1V7 117 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 TRAV1-2A0A0B4J238 106 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 IGKV1-6A0A0C4DH72 117 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 CCL24O00175 119 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 NBR2O15453 112 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 DENRO43583 198 aaKnown RBP14.02□□□□□ -0.17
TPM3-220ENST00000509601 RRP9O43818 475 aaKnown RBP14.02□□□□□ -0.17
TPM3-220ENST00000509601 NDUFA3O95167 84 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 HLA-DRB1P01911 266 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 PSMB8P28062 276 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 HOXD3P31249 432 aaPredicted RBP14.02□□□□□ -0.17
TPM3-220ENST00000509601 HLA-DRB3P79483 266 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 C5orf64Q2M2E5 130 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 CXorf66Q5JRM2 361 aaPredicted RBP14.02□□□□□ -0.17
TPM3-220ENST00000509601 OR56B1Q8NGI3 324 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 PTX4Q96A99 478 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 CMSS1Q9BQ75 279 aaKnown RBP14.02□□□□□ -0.17
TPM3-220ENST00000509601 CHCHD6Q9BRQ6 235 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 OR51J1Q9H342 316 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 RAB22AQ9UL26 194 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 WSB1Q9Y6I7 421 aa14.02□□□□□ -0.17
TPM3-220ENST00000509601 TRDV1A0A1B0GX56 115 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 WI2-2373I1.2A0A1W2PRP0 233 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 G3V318 75 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 VDAC1P21796 283 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 ZBTB25P24278 435 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 OR10A3P58181 314 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 MOGAT2Q3SYC2 334 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 LIN54Q6MZP7 749 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 GLDNQ6ZMI3 551 aaPredicted RBP14.01□□□□□ -0.17
TPM3-220ENST00000509601 KLK15Q9H2R5 256 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 NDUFB11Q9NX14 153 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 RNF150Q9ULK6 438 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 MGAT4AQ9UM21 535 aa14.01□□□□□ -0.17
TPM3-220ENST00000509601 ATP6V1G2O95670 118 aa14□□□□□ -0.17
TPM3-220ENST00000509601 LINC00205P59089 165 aa14□□□□□ -0.17
TPM3-220ENST00000509601 DEFB136Q30KP8 78 aa14□□□□□ -0.17
TPM3-220ENST00000509601 FAM131AQ6UXB0 335 aa14□□□□□ -0.17
TPM3-220ENST00000509601 OR5AN1Q8NGI8 311 aa14□□□□□ -0.17
TPM3-220ENST00000509601 MYOZ3Q8TDC0 251 aa14□□□□□ -0.17
TPM3-220ENST00000509601 C12orf4Q9NQ89 552 aa14□□□□□ -0.17
TPM3-220ENST00000509601 IFITM5A6NNB3 132 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 TRDCB7Z8K6 153 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 H0YJW9 148 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 FCN1O00602 326 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 PDCD5O14737 125 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 ATP6V0E1O15342 81 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 MRPS14O60783 128 aaKnown RBP13.99□□□□□ -0.17
TPM3-220ENST00000509601 IGLV1-40P01703 118 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 OR5H8P0DN80 308 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 SNRPBP14678 240 aaKnown RBP13.99□□□□□ -0.17
TPM3-220ENST00000509601 NR2C2APQ86WQ0 139 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 MCRIP2Q9BUT9 160 aaKnown RBP13.99□□□□□ -0.17
TPM3-220ENST00000509601 TOLLIPQ9H0E2 274 aa13.99□□□□□ -0.17
TPM3-220ENST00000509601 RAB27BO00194 218 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 HSPA12AO43301 675 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 MC5RP33032 325 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 RANBP1P43487 201 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 GABARAPL2P60520 117 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 UBE2UQ5VVX9 321 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms