RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MRPL41Q8IXM3 137 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 FAM89BQ8N5H3 189 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 LINC00482Q8N8I6 264 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 WFDC9Q8NEX5 89 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 OR8H1Q8NGG4 311 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 CMSS1Q9BQ75 279 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 C12orf4Q9NQ89 552 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 NDUFB11Q9NX14 153 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 ZNF107Q9UII5 783 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 A0A075B6Q4 140 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 A0A0B4J203 849 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 PDCD5O14737 125 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 SCTP09683 121 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 VDAC1P21796 283 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 MYL9P24844 172 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 HOXD3P31249 432 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 CEACAM6P40199 344 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 THBS3P49746 956 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 RAB25P57735 213 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 DEFB136Q30KP8 78 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 MOGAT2Q3SYC2 334 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 PLAC9Q5JTB6 97 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 C22orf42Q6IC83 251 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 TEX38Q6PEX7 206 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 OR56B1Q8NGI3 324 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 HSF4Q9ULV5 492 aa11.63□□□□□ -0.55
UBE2D3-228ENST00000508974 ZBTB25P24278 435 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 PSMB9P28065 219 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 GABARAPL2P60520 117 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 CXorf66Q5JRM2 361 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 LY6G6FQ5SQ64 297 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 REC114Q7Z4M0 266 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 ZNF695Q8IW36 515 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 RCC1LQ96I51 464 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 Q9N2K0 584 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 PARP11Q9NR21 331 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 PIPOXQ9P0Z9 390 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
UBE2D3-228ENST00000508974 DNAH3Q8TD57 4116 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 H7C2Y5 167 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 RAB29O14966 203 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 LDLRAD4O15165 306 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 NBR2O15453 112 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 RAB3BP20337 219 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 PSMD7P51665 324 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 MRPS15P82914 257 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 DRAXINQ8NBI3 349 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 MAFIPQ8WZ33 124 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 RAB3CQ96E17 227 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 KCTD7Q96MP8 289 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 C11orf54Q9H0W9 315 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 RAB22AQ9UL26 194 aa11.61□□□□□ -0.55
UBE2D3-228ENST00000508974 TRAV1-2A0A0B4J238 106 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 TRDV1A0A1B0GX56 115 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 IFITM5A6NNB3 132 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 G3V318 75 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 CD3GP09693 182 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 GNB3P16520 340 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 KRTAP10-11P60412 298 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 FOXE3Q13461 319 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 PLGLAQ15195 96 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 CD200R1LQ6Q8B3 271 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 SPARTQ8N0X7 666 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 RAX2Q96IS3 184 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 Q9H521 79 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 MGAT4AQ9UM21 535 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 KCNK7Q9Y2U2 307 aa11.6□□□□□ -0.55
UBE2D3-228ENST00000508974 TRDCB7Z8K6 153 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 BET1O15155 118 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 MYCNOSP40205 109 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 LINC00205P59089 165 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 CFHR3Q02985 330 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 UBE2UQ5VVX9 321 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 LIN54Q6MZP7 749 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 FAM71F2Q6NXP2 309 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 OR10R2Q8NGX6 335 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 ABHD5Q8WTS1 349 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 EDARADDQ8WWZ3 215 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 OR51J1Q9H342 316 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 RDH8Q9NYR8 311 aa11.59□□□□□ -0.55
UBE2D3-228ENST00000508974 ZNF230Q9UIE0 474 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms