RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 SOX15O60248 233 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ZNF780AO75290 641 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 HBZP02008 142 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 OR8U9P0C7N5 309 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 EGR2P11161 476 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 FCGR1AP12314 374 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 GABRB1P18505 474 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 MYF6P23409 242 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ACTBP60709 375 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 MORN2Q502X0 79 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 SYT6Q5T7P8 510 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 LPCAT4Q643R3 524 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 LIN54Q6MZP7 749 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 LYPD6Q86Y78 171 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ODF3L1Q8IXM7 274 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 RGP1Q92546 391 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ISOC1Q96CN7 298 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 FAM192AQ9GZU8 254 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ALX4Q9H161 411 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 RAB9BQ9NP90 201 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 TMEM138Q9NPI0 162 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 IMPAD1Q9NX62 359 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 TAS2R4Q9NYW5 299 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 RCC2Q9P258 522 aaKnown RBP6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 GNG12Q9UBI6 72 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 ING4Q9UNL4 249 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 NUBP2Q9Y5Y2 271 aa6.6□□□□□ -1.35
COL4A3BP-206ENST00000508809 A0A1W2PP11 408 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 AIPO00170 330 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ARPC1BO15143 372 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 NBR2O15453 112 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 SC5DO75845 299 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 NDUFA3O95167 84 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ALPLP05186 524 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 GTF2F2P13984 249 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 CNTFRP26992 372 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 BLVRBP30043 206 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 BDKRB2P30411 391 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ZNF93P35789 620 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 GBX2P52951 348 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 GABPB1Q06547 395 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 LY6G6FQ5SQ64 297 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ATAD3CQ5T2N8 411 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 C6orf183Q5T699 404 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ZNF660Q6AZW8 331 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 TRAT1Q6PIZ9 186 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ADAMTSL5Q6ZMM2 481 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 STX19Q8N4C7 294 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 TCTEX1D1Q8N7M0 179 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 OR10V1Q8NGI7 309 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 OR1L1Q8NH94 360 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 GPR148Q8TDV2 347 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 TSEN15Q8WW01 171 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 LINC00476Q8WZB0 136 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 RAB24Q969Q5 203 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 MRPS24Q96EL2 167 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ZNF251Q9BRH9 671 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 SPACA1Q9HBV2 294 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 MRPS18AQ9NVS2 196 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 TRAPPC2LQ9UL33 140 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 ERGIC3Q9Y282 383 aa6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-206ENST00000508809 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.36
COL4A3BP-206ENST00000508809 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 A0A087WW49 117 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 MCRIP1C9JLW8 97 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 HSPA12AO43301 675 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 CA11O75493 328 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 GPX5O75715 221 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 FADS2O95864 444 aaKnown RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 IGLV1-51P01701 117 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 CD1AP06126 327 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 GLAP06280 429 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 CD2P06729 351 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 RCC1P18754 421 aaPredicted RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 SERPINA2P20848 420 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 SOX2P48431 317 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 GTF2A1P52655 376 aaPredicted RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 ADARB1P78563 741 aaKnown RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 NDPQ00604 133 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 RAB40BQ12829 278 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 GPR176Q14439 515 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 SLC22A6Q4U2R8 563 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 CCDC58Q4VC31 144 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 AKIRIN2Q53H80 203 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 DDI2Q5TDH0 399 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 RPL22L1Q6P5R6 122 aaKnown RBP6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 CD200R1LQ6Q8B3 271 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 ZNF833PQ6ZTB9 187 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 ZNF554Q86TJ5 538 aa6.58□□□□□ -1.36
COL4A3BP-206ENST00000508809 RHOXF1Q8NHV9 184 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms