RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SIRT7Q9NRC8 400 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ELF5Q9UKW6 265 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 KCNE3Q9Y6H6 103 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 NCKAP5O14513 1909 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 RAB19A4D1S5 217 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR6C68A6NDL8 312 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 C22orf46C9J442 243 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PPP6CO00743 305 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ARPC1BO15143 372 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 HOXA3O43365 443 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 SPDEFO95238 335 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 DUS4LO95620 317 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 LIPFP07098 398 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MELTFP08582 738 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TSPOP30536 169 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 FCGR2CP31995 323 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PMELP40967 661 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CLDN12P56749 244 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 COL10A1Q03692 680 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 FAM162BQ5T6X4 162 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 HIST2H3AQ71DI3 136 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 VMO1Q7Z5L0 202 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 STXBP6Q8NFX7 210 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR2T35Q8NGX2 323 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR4A5Q8NH83 315 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TAMM41Q96BW9 452 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 DUS3LQ96G46 650 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 OR2J1Q9GZK6 312 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PRSS22Q9GZN4 317 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SRRQ9GZT4 340 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SLC25A32Q9H2D1 315 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SLA2Q9H6Q3 261 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 RNF122Q9H9V4 155 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 RPS10P5Q9NQ39 176 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 DCAF13Q9NV06 445 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 PIPOXQ9P0Z9 390 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SYNGR2O43760 224 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ADAP1O75689 374 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 APOC3P02656 99 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 MTNR1BP49286 362 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PTTG1IPP53801 180 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 RAB5BP61020 215 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 BTG1P62324 171 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 DLK1P80370 383 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR2F1Q13607 317 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 CR1LQ2VPA4 569 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PRSS48Q7RTY5 328 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 HSD17B13Q7Z5P4 300 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 LYSMD2Q8IV50 215 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SYT8Q8NBV8 401 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MARCH1Q8TCQ1 289 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 SFT2D1Q8WV19 159 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 NRIP3Q9NQ35 241 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MMP26Q9NRE1 261 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PURGQ9UJV8 347 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 MMP24Q9Y5R2 645 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MYO9AB2RTY4 2548 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 A0A0G2JLM5 398 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 hCG_38984A0A1B0GV85 526 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 J3QLI3 93 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 KCNAB3O43448 404 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MITFO75030 526 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 ACAA1P09110 424 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 COX5AP20674 150 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR2B8PP59922 312 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 RBMS2Q15434 407 aaKnown RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 APOOLQ6UXV4 268 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 STAC2Q6ZMT1 411 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TMEM179BQ7Z7N9 219 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 LYG2Q86SG7 212 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ZNF561Q8N587 486 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR10S1Q8NGN2 331 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 BLNKQ8WV28 456 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 NIPSNAP3BQ9BS92 247 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR51M1Q9H341 326 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 HRH4Q9H3N8 390 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ZNF275Q9NSD4 429 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 IGLV3-12A0A075B6K2 115 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGHV1-18A0A0C4DH31 117 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGKV3OR2-268A0A0C4DH90 116 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 TRBV4-1A0A0J9YWV2 114 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 A0A1W2PNU3 283 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 M0QYG6 137 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR2A4O95047 310 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 PLAUP00749 431 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 IGKV1D-16P01601 117 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 MT-ND4LP03901 98 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 DTX2Q86UW9 622 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 Q8NA96 180 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 C5orf17Q8NAS9 161 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 NFAM1Q8NET5 270 aaPredicted RBP2.53□□□□□ -2
NEDD4-208ENST00000508342 OR52N4Q8NGI2 321 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR1B1Q8NGR6 318 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR13C5Q8NGS8 318 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OIT3Q8WWZ8 545 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 OR2A7Q96R45 310 aa2.53□□□□□ -2
NEDD4-208ENST00000508342 ABHD1Q96SE0 405 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms