RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 LYPD6Q86Y78 171 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ZNF567Q8N184 647 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 EIF4E3Q8N5X7 224 aaKnown RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 TMEM161BQ8NDZ6 487 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ERMNQ8TAM6 284 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 EEF1AKMT1Q8WVE0 214 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 OR5P3Q8WZ94 311 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 RAB8BQ92930 207 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 HIST1H2BAQ96A08 127 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 OPTNQ96CV9 577 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 OTUB2Q96DC9 234 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 ABHD14BQ96IU4 210 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 UPK3BQ9BT76 320 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 MED18Q9BUE0 208 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 BCL2L14Q9BZR8 327 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 EIF5A2Q9GZV4 153 aaKnown RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 MAP1LC3AQ9H492 121 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 KCNIP2Q9NS61 270 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 POLR1DQ9Y2S0 133 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 HDGFL3Q9Y3E1 203 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 THADAQ6YHU6 1953 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 CRB1P82279 1406 aa0.95□□□□□ -2.26
SMN2-208ENST00000508258 BRD4O60885 1362 aaPredicted RBP0.95□□□□□ -2.26
SMN2-208ENST00000508258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 TRAV8-1A0A0A6YYK1 113 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 A0A1W2PNN7 141 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 C5orf49A4QMS7 147 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 LINC00862A6NCI5 91 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 D6RAR5 112 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 MRASO14807 208 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ACOX3O15254 700 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 EEF1E1O43324 174 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 SLC25A20O43772 301 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 DEDDO75618 318 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 STK16O75716 305 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 REG1AP05451 166 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 IL3P08700 152 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 CD7P09564 240 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 OR4A8P0C604 315 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 NQO1P15559 274 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 ZNF7P17097 686 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 MYL12AP19105 171 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 COL8A2P25067 703 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 RPS12P25398 132 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 DDTP30046 118 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 OR10J1P30954 320 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 AP2S1P53680 142 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 KRTAP10-10P60014 251 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ACTBP60709 375 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ACTG1P63261 375 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 SLC35A2P78381 396 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 HLA-DRB3P79483 266 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 DEFA6Q01524 100 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 TSPAN31Q12999 210 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ITGB3BPQ13352 177 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 ZNF141Q15928 474 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 LGALSLQ3ZCW2 172 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 MRPL51Q4U2R6 128 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 N4BP2L1Q5TBK1 243 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 SYPL2Q5VXT5 272 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 SDIM1Q6ZPB5 146 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 SCXQ7RTU7 201 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 NAA40Q86UY6 237 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 COMMD7Q86VX2 200 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 HS3ST5Q8IZT8 346 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ZNF664Q8N3J9 261 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 LINC00304Q8N9R0 145 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 OR8K1Q8NGG5 319 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 MUC7Q8TAX7 377 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 Q8WTZ3 238 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 RAD51AP1Q96B01 352 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 TESCQ96BS2 214 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 MS4A6EQ96DS6 147 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 CPNE2Q96FN4 548 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 SLC25A44Q96H78 314 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 TBX5Q99593 518 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 TM2D3Q9BRN9 247 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ABCG5Q9H222 651 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 C11orf1Q9H5F2 150 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 HES4Q9HCC6 221 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 XPNPEP1Q9NQW7 623 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ASF1BQ9NVP2 202 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 C3orf18Q9UK00 162 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 DKKL1Q9UK85 242 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 DNAJC12Q9UKB3 198 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 GUCA1BQ9UMX6 200 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 CARHSP1Q9Y2V2 147 aaKnown RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 WASHC3Q9Y3C0 194 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 FIS1Q9Y3D6 152 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 PCYT1BQ9Y5K3 369 aaPredicted RBP0.94□□□□□ -2.26
SMN2-208ENST00000508258 ALG5Q9Y673 324 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 NACADO15069 1562 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 KIF15Q9NS87 1388 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 ZSWIM8A7E2V4 1837 aa0.94□□□□□ -2.26
SMN2-208ENST00000508258 GPR179Q6PRD1 2367 aa0.93□□□□□ -2.26
SMN2-208ENST00000508258 LTBP4Q8N2S1 1624 aa0.93□□□□□ -2.26
SMN2-208ENST00000508258 KMT2EQ8IZD2 1858 aa0.93□□□□□ -2.26
SMN2-208ENST00000508258 SHANK3Q9BYB0 1731 aa0.93□□□□□ -2.26
SMN2-208ENST00000508258 TRPM3Q9HCF6 1732 aaPredicted RBP0.93□□□□□ -2.26
SMN2-208ENST00000508258 IGKV1D-17A0A075B6S4 117 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms