RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PARP16Q8N5Y8 322 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 DEFB125Q8N687 156 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 ACBD7Q8N6N7 88 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 SETD6Q8TBK2 473 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 IL1F10Q8WWZ1 152 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 MRPL48Q96GC5 212 aaKnown RBP4.39□□□□□ -1.71
GYPB-208ENST00000507009 ST6GALNAC5Q9BVH7 336 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 BANF2Q9H503 90 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 TAF9BQ9HBM6 251 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 RAB9BQ9NP90 201 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 KCNIP1Q9NZI2 227 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 METTL1Q9UBP6 276 aaKnown RBP4.39□□□□□ -1.71
GYPB-208ENST00000507009 ENOPH1Q9UHY7 261 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 ZNF580Q9UK33 172 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 POMPQ9Y244 141 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
GYPB-208ENST00000507009 TNCP24821 2201 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 HERC2O95714 4834 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 SHISA3A0PJX4 238 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 NDUFA3O95167 84 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 CNIH1O95406 144 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 CA2P00918 260 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 CD2P06729 351 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 CD7P09564 240 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 APELAP0DMC3 54 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 EGR2P11161 476 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 GTF2F2P13984 249 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 ZP3P21754 424 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 FASP25445 335 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 BDKRB2P30411 391 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 PAX5Q02548 391 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 TMED1Q13445 227 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 DYRK1AQ13627 763 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 ATP6AP1Q15904 470 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 GUCA2BQ16661 112 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 RPEL1Q2QD12 228 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 RPL39P5Q59GN2 51 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 C19orf54Q5BKX5 351 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 PYHIN1Q6K0P9 492 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 LINC00596Q86U02 117 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 ODF3L1Q8IXM7 274 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 RPP25LQ8N5L8 163 aaKnown RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 JAGN1Q8N5M9 183 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 TCTEX1D1Q8N7M0 179 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 DRAXINQ8NBI3 349 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 CCDC197Q8NCU1 140 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 NPBQ8NG41 125 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 OR13C5Q8NGS8 318 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 DYNLRB2Q8TF09 96 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 RGP1Q92546 391 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 MUL1Q969V5 352 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 TMEM106AQ96A25 262 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 LGALS12Q96DT0 336 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 ZNF184Q99676 751 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 NEURL2Q9BR09 285 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 JAM3Q9BX67 310 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 SELENOIQ9C0D9 397 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 IFT22Q9H7X7 185 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 SRD5A3Q9H8P0 318 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 RANGRFQ9HD47 186 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 AMBNQ9NP70 447 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 TMEM138Q9NPI0 162 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 PAK1IP1Q9NWT1 392 aaPredicted RBP4.38□□□□□ -1.71
GYPB-208ENST00000507009 OAZ3Q9UMX2 235 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 NUBP2Q9Y5Y2 271 aa4.38□□□□□ -1.71
GYPB-208ENST00000507009 OR11H12B2RN74 326 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 J3QRE1 110 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 DEDDO75618 318 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 CRTAPO75718 401 aaPredicted RBP4.37□□□□□ -1.71
GYPB-208ENST00000507009 BAG2O95816 211 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 BPNT1O95861 308 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 FADS2O95864 444 aaKnown RBP4.37□□□□□ -1.71
GYPB-208ENST00000507009 TRBV12-3P01733 135 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 TFAP2AP05549 437 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 CSN3P07498 182 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 RPS16P62249 146 aaKnown RBP4.37□□□□□ -1.71
GYPB-208ENST00000507009 RIPK1Q13546 671 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
GYPB-208ENST00000507009 FXYD3Q14802 87 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 PSG5Q15238 335 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 TATDN3Q17R31 274 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 TMEM30BQ3MIR4 351 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 Q3ZCU0 254 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 DNAL1Q4LDG9 190 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 NHLRC3Q5JS37 347 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 C6orf141Q5SZD1 244 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 TRAT1Q6PIZ9 186 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 CD200R1LQ6Q8B3 271 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 GLIPR1L1Q6UWM5 242 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 ASCL4Q6XD76 172 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 ZNF833PQ6ZTB9 187 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 Q8N402 240 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 POC5Q8NA72 575 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 BVESQ8NE79 360 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 GPR148Q8TDV2 347 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 FAM46BQ96A09 425 aa4.37□□□□□ -1.71
GYPB-208ENST00000507009 ABHD14BQ96IU4 210 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms