RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 CIDECQ96AQ7 238 aaPredicted RBP0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 MRPS24Q96EL2 167 aaKnown RBP0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 DNAJC12Q9UKB3 198 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 SNX12Q9UMY4 172 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 FIS1Q9Y3D6 152 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 COL6A3P12111 3177 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 CHD5Q8TDI0 1954 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 KIAA2026Q5HYC2 2103 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
CDC42SE2-210ENST00000506929 SYNE2Q8WXH0 6885 aaKnown RBP0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 UBR4Q5T4S7 5183 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 OR5K4A6NMS3 321 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 SNAP29O95721 258 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 ZNF728P0DKX0 622 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 OR13C7P0DN81 318 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 ATF1P18846 271 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 ADORA1P30542 326 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 RCVRNP35243 200 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 FLOT2Q14254 428 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 ZNF791Q3KP31 576 aaPredicted RBP0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 MESTQ5EB52 335 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 PLCZ1Q86YW0 608 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 PACRGLQ8N7B6 248 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 C10orf105Q8TEF2 133 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 CYGBQ8WWM9 190 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 TAMM41Q96BW9 452 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 TMEM56Q96MV1 263 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 NAA38Q9BRA0 125 aaKnown RBP0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 CHMP4BQ9H444 224 aaKnown RBP0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 DOK5Q9P104 306 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 ALG5Q9Y673 324 aa0.69□□□□□ -2.3
CDC42SE2-210ENST00000506929 CLUHO75153 1309 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 MYOFQ9NZM1 2061 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 OR11H12B2RN74 326 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 NDUFS8O00217 210 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 UBFD1O14562 309 aaKnown RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 CRXO43186 299 aaPredicted RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 PGLYRP1O75594 196 aaPredicted RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 TNFAIP8O95379 198 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 GP1BAP07359 652 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 LIMS3P0CW19 117 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 LIMS4P0CW20 117 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 NUP62P37198 522 aaPredicted RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 CDK9P50750 372 aaKnown RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 STX3Q13277 289 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 MTERF4Q7Z6M4 381 aaKnown RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 MRPL52Q86TS9 123 aaKnown RBP0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 ACBD4Q8NC06 268 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 OR11H2Q8NH07 326 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 FNDC9Q8TBE3 224 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 TMEM239Q8WW34 195 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 CCDC127Q96BQ5 260 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 MED28Q9H204 178 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 GOLPH3Q9H4A6 298 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 TMEM216Q9P0N5 145 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 LINC00527Q9UJ94 153 aa0.68□□□□□ -2.3
CDC42SE2-210ENST00000506929 ZNF532Q9HCE3 1301 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 NAV1Q8NEY1 1877 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 PCDH15Q96QU1 1955 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 M0QYV0 167 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 SULT1C2O00338 296 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 MPZL2O60487 215 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 SLC35E2BP0CK96 405 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 NPPCP23582 126 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 OR1E2P47887 323 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ERHP84090 104 aaKnown RBP0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ZNF90Q03938 601 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 DRAM2Q6UX65 266 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ST13P4Q8IZP2 240 aaPredicted RBP0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 CNEP1R1Q8N9A8 125 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 CCDC112Q8NEF3 446 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ASB17Q8WXJ9 295 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ABHD14BQ96IU4 210 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 SERPINB11Q96P15 392 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 MND1Q9BWT6 205 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 METTL8Q9H825 291 aaKnown RBP0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 ANGPT4Q9Y264 503 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 FBN2P35556 2912 aa0.67□□□□□ -2.3
CDC42SE2-210ENST00000506929 FREM1Q5H8C1 2179 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 BAZ2BQ9UIF8 2168 aaKnown RBP0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 ADAP1O75689 374 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 CRYBA1P05813 215 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 BPGMP07738 259 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 OPRM1P35372 400 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 XCL1P47992 114 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 PSG3Q16557 428 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 FAM201AQ5SY85 155 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 SPATA31B1PQ5VZV4 182 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 TTC33Q6PID6 262 aaPredicted RBP0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 RPS4Y2Q8TD47 263 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 TNFAIP8L1Q8WVP5 186 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 RNASE6Q93091 150 aaKnown RBP0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 ACY3Q96HD9 319 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 HHLA2Q9UM44 414 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 CPAMD8Q8IZJ3 1885 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 CUL9Q8IWT3 2517 aa0.66□□□□□ -2.3
CDC42SE2-210ENST00000506929 PKD1L2Q7Z442 2459 aa0.65□□□□□ -2.3
CDC42SE2-210ENST00000506929 DISP1Q96F81 1524 aa0.65□□□□□ -2.31
CDC42SE2-210ENST00000506929 TMEM235A6NFC5 223 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms