RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 NOL4LQ96MY1 436 aaPredicted RBP12.3□□□□□ -0.44
MED28-204ENST00000506409 S1PR3Q99500 378 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
MED28-204ENST00000506409 ATG5Q9H1Y0 275 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 ITGB1BP1O14713 200 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 FCGR3AP08637 254 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 F2RL1P55085 397 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 DEFA6Q01524 100 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 FAM71F2Q6NXP2 309 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 ZNF329Q86UD4 541 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 RNF167Q9H6Y7 350 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 LINC00527Q9UJ94 153 aa12.29□□□□□ -0.44
MED28-204ENST00000506409 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
MED28-204ENST00000506409 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 IGKV1-6A0A0C4DH72 117 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 FABP7O15540 132 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 TNFAIP8O95379 198 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 SNRPBP14678 240 aaKnown RBP12.28□□□□□ -0.44
MED28-204ENST00000506409 GPR12P47775 334 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 SLC35B1P78383 322 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 MXD1Q05195 221 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 ARL6IP1Q15041 203 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 MMDQ15546 238 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 RPL39P5Q59GN2 51 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 TSPAN14Q8NG11 270 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 OR4A4PQ8NGN8 299 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 ABHD14BQ96IU4 210 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 AGMATQ9BSE5 352 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 C11orf54Q9H0W9 315 aaPredicted RBP12.28□□□□□ -0.44
MED28-204ENST00000506409 GHITMQ9H3K2 345 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 VCX3AQ9NNX9 186 aa12.28□□□□□ -0.44
MED28-204ENST00000506409 A0A087WXM4 84 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 AP4M1O00189 453 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 KCNAB3O43448 404 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 PF4V1P10720 104 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 SOX6P35712 828 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 TALDO1P37837 337 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 SERPINB10P48595 397 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 ACTBP60709 375 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 STPG2Q8N412 459 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 LGALS14Q8TCE9 139 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 RDH8Q9NYR8 311 aa12.27□□□□□ -0.45
MED28-204ENST00000506409 ZNF230Q9UIE0 474 aaPredicted RBP12.27□□□□□ -0.45
MED28-204ENST00000506409 BET1O15155 118 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 SCGNO76038 276 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 FAM131AQ6UXB0 335 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 C1QL4Q86Z23 238 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 PHF21AQ96BD5 680 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 RITA1Q96K30 269 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 HSPB9Q9BQS6 159 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 ZNF221Q9UK13 617 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 RNF150Q9ULK6 438 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 CMYA5Q8N3K9 4069 aa12.26□□□□□ -0.45
MED28-204ENST00000506409 OR5H14A6NHG9 310 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 NBR2O15453 112 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 WIPF1O43516 503 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 RRP9O43818 475 aaKnown RBP12.25□□□□□ -0.45
MED28-204ENST00000506409 GSTT2P0CG29 244 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 GSTT2BP0CG30 244 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 IDNKQ5T6J7 187 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
MED28-204ENST00000506409 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 GON7Q9BXV9 100 aa12.25□□□□□ -0.45
MED28-204ENST00000506409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.25□□□□□ -0.45
MED28-204ENST00000506409 ZNF107Q9UII5 783 aaPredicted RBP12.25□□□□□ -0.45
MED28-204ENST00000506409 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
MED28-204ENST00000506409 TRBV6-7A0A0A0MS04 114 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 H0YJW9 148 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 H7C2Y5 167 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 DIRAS3O95661 229 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 DTYMKP23919 212 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 CNTFRP26992 372 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 MC5RP33032 325 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 SCAND1P57086 179 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 SRSF7Q16629 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
MED28-204ENST00000506409 HACD4Q5VWC8 232 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 COMMD1Q8N668 190 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 GINS4Q9BRT9 223 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 TOLLIPQ9H0E2 274 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 RHBDL2Q9NX52 303 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 KIAA1456Q9P272 454 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms