RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR4D10Q8NGI6 311 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 CCDC107Q8WV48 283 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 THAP7Q9BT49 309 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 SDHAF2Q9NX18 166 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 PIPOXQ9P0Z9 390 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 MAP1AP78559 2803 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 NDUFA7O95182 113 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 GNRHRP30968 328 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 MEF2DQ14814 521 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 CCBE1Q6UXH8 406 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 LHFPL4Q7Z7J7 247 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 TCTEX1D1Q8N7M0 179 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 EDARADDQ8WWZ3 215 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 WDR12Q9GZL7 423 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 C6orf62Q9GZU0 229 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 PALMDQ9NP74 551 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 DPM3Q9P2X0 92 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 SOX21Q9Y651 276 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGHV1-3A0A0C4DH29 117 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 LEUTXA8MZ59 168 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 PPYP01298 95 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 EPHA1P21709 976 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 RUSC1-AS1Q66K80 236 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 SLC6A7Q99884 636 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR5H14A6NHG9 310 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 H0YJW9 148 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 B3GALNT1O75752 331 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 DUTP33316 252 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 PPP1CCP36873 323 aaKnown RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 DEFB112Q30KQ8 113 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 TMEM177Q53S58 311 aa6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 RTBDNQ9BSG5 229 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 RANBP3Q9H6Z4 567 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 TET2Q6N021 2002 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE2-208ENST00000505065 RAB29O14966 203 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 HRH1P35367 487 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 SSBP2P81877 361 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 SCGB2A2Q13296 93 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 SLC9A3R2Q15599 337 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF66Q6ZN08 573 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 KCTD9Q7L273 389 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 PRIMA1Q86XR5 153 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAM71E2Q8N5Q1 922 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 HRASLSQ9HDD0 168 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 YAE1D1Q9NRH1 226 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 NAP1L6A6NFF2 107 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 UPK1BO75841 260 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 IL7P13232 177 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 AADACP22760 399 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 TALDO1P37837 337 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR4C16Q8NGL9 310 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR10J5Q8NHC4 309 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 SIRT7Q9NRC8 400 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 TCF19Q9Y242 345 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 CD3DP04234 171 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 ARG1P05089 322 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 HNF1AP20823 631 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 HTR1DP28221 377 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 CEACAM6P40199 344 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 CFHR3Q02985 330 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF846Q147U1 533 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 PVRIGQ6DKI7 326 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF383Q8NA42 475 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR10V1Q8NGI7 309 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR5R1Q8NH85 324 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 SETD6Q8TBK2 473 aa6.63□□□□□ -1.35
CDC42SE2-208ENST00000505065 RBBP9O75884 186 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 AKAIN1P0CW23 69 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR5H8P0DN80 308 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 OMGP23515 440 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 SLC6A1P30531 599 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 STEAP1BQ6NZ63 245 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 Q8N402 240 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 DUSP18Q8NEJ0 188 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 RBM14Q96PK6 669 aaKnown RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAM25AB3EWG3 89 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAM25CB3EWG5 89 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAM25GB3EWG6 89 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 HSD17B6O14756 317 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 TSPAN9O75954 239 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 S100A5P33763 92 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 LRRC75BQ2VPJ9 315 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 GPR157Q5UAW9 335 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAHD2BQ6P2I3 314 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 DRAM1Q8N682 238 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 TMEM230Q96A57 120 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAHD2AQ96GK7 314 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR2S2Q9NQN1 319 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 VENTXO95231 258 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 SPDEFO95238 335 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 SLC38A6Q8IZM9 456 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 LRTM2Q8N967 370 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 MAFIPQ8WZ33 124 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 TINAGL1Q9GZM7 467 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms