RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CT45A3Q8NHU0 189 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 ZFAND1Q8TCF1 268 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 H1FXQ92522 213 aaKnown RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 LEAP2Q969E1 77 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 MSI2Q96DH6 328 aaKnown RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 TP53RKQ96S44 253 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 OR2S2Q9NQN1 319 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 ZNRD1Q9P1U0 126 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 NDUFS8O00217 210 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 HSD17B6O14756 317 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 CREBL2O60519 120 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 IGHV3-7P01780 117 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 OR8U9P0C7N5 309 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 HLA-GP17693 338 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 CR1P17927 2039 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 CD34P28906 385 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 DLX1P56177 255 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 RPL30P62888 115 aaKnown RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 ARSJQ5FYB0 599 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 DCAF12L2Q5VW00 463 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 HCP5Q6MZN7 132 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 ZNF645Q8N7E2 425 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 OR2AK2Q8NG84 335 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 OR8U1Q8NH10 309 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 GLYATL2Q8WU03 294 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 FAM216AQ8WUB2 273 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 RTN4IP1Q8WWV3 396 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 PERPQ96FX8 193 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 ABHD14BQ96IU4 210 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 SSBP3Q9BWW4 388 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 OR2D2Q9H210 308 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 SDHAF2Q9NX18 166 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
TPM3-217ENST00000504663 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
TPM3-217ENST00000504663 FASNP49327 2511 aaKnown RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 A0A1W2PPE3 182 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 BOLA2-SMG1P6H3BVE0 249 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 MPPED1O15442 326 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 HSPA12AO43301 675 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 PGLYRP1O75594 196 aaPredicted RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 RBP4P02753 201 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 OR5AC1P0C628 307 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 H2BFSP57053 126 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 LINC00205P59089 165 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 SLC9A3R2Q15599 337 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 Q3ZCU0 254 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 SLC25A48Q6ZT89 311 aaKnown RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 TBC1D26Q86UD7 250 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 C12orf45Q8N5I9 185 aaPredicted RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 LINC00311Q8N616 119 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 C8orf31Q8N9H6 132 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 FAM168AQ92567 244 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 MBD6Q96DN6 1003 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 C1orf159Q96HA4 380 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 AKR1E2Q96JD6 320 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 FYTTD1Q96QD9 318 aaKnown RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 ABHD14AQ9BUJ0 271 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 GAL3ST2Q9H3Q3 398 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 GPN1Q9HCN4 374 aaPredicted RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 RANGRFQ9HD47 186 aaPredicted RBP8.49□□□□□ -1.05
TPM3-217ENST00000504663 RNF150Q9ULK6 438 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 PSG11Q9UQ72 335 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
TPM3-217ENST00000504663 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
TPM3-217ENST00000504663 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 LINC00473A8K010 186 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 H0Y980 276 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 CCSO14618 274 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 TNFSF12O43508 249 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 OR2A4O95047 310 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 MMP9P14780 707 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 UCP1P25874 307 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 GNB2P62879 340 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
TPM3-217ENST00000504663 DEFB113Q30KQ7 82 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 SP6Q3SY56 376 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 ZNF585BQ52M93 769 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 LPCAT3Q6P1A2 487 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 TCTE3Q8IZS6 198 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 LRTM2Q8N967 370 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 CCDC71LQ8N9Z2 235 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 OR5M8Q8NGP6 311 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 CASTOR1Q8WTX7 329 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 DDB2Q92466 427 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms