RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 H2BFMP0C1H6 154 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 C1QTNF9P0C862 333 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 CCL11P51671 97 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM258P61165 79 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 CD69Q07108 199 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SRSF9Q13242 221 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLCN3-204ENST00000504131 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 KIR2DL5AQ8N109 375 aa5.42□□□□□ -1.54
CLCN3-204ENST00000504131 PIGBOS1A0A0B4J2F0 54 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS38A1L453 326 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 ZC3H12DA2A288 527 aaKnown RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 G3V2L1 256 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 BUB3O43684 328 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 CLDN11O75508 207 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 NUDT14O95848 222 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SEC11BP0C7V7 166 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 CLDN6P56747 220 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 LILRA3Q8N6C8 439 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 RNF149Q8NC42 400 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 CLEC4CQ8WTT0 213 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 C1RLQ9NZP8 487 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 DKK4Q9UBT3 224 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 PRNDQ9UKY0 176 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 ITGB4P16144 1822 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TRDV1A0A1B0GX56 115 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 ANTXRLA6NF34 631 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 C9orf118A6NHY6 69 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 MLNRO43193 412 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 GPX1P07203 203 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 PSG6Q00889 435 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 VMA21Q3ZAQ7 101 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 CXorf66Q5JRM2 361 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM255AQ5JRV8 349 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM178AQ8NBL3 297 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM170AQ8WVE7 144 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 COA3Q9Y2R0 106 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 NEUROG3Q9Y4Z2 214 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 RFNGQ9Y644 331 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 LAMA4Q16363 1823 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 A0A1W2PP55 124 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 A8MWV9 139 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 HYPMO75409 117 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 UNGP13051 313 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SELPP16109 830 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SFTPDP35247 375 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 HSPE1P61604 102 aaKnown RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TIAL1Q01085 375 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SLC25A52Q3SY17 297 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 MORN2Q502X0 79 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TECRLQ5HYJ1 363 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SLC35E4Q6ICL7 350 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 WFDC11Q8NEX6 87 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SLC35B2Q8TB61 432 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 NT5CQ8TCD5 201 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 EMG1Q92979 244 aaKnown RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 C8orf44Q96CB5 159 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 SMIM8Q96KF7 97 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TLCD2A6NGC4 264 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 PRSS29PA6NIE9 313 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 LDB3O75112 727 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 PAX1P15863 534 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 WASP42768 502 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 RPL8P62917 257 aaKnown RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TAF10Q12962 218 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 RGNQ15493 299 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM155Q4W5P6 130 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 ZADH2Q8N4Q0 377 aa5.41□□□□□ -1.54
CLCN3-204ENST00000504131 MRPL30Q8TCC3 161 aaKnown RBP5.41□□□□□ -1.54
CLCN3-204ENST00000504131 BCORQ6W2J9 1755 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 MED19A0JLT2 244 aaPredicted RBP5.4□□□□□ -1.54
CLCN3-204ENST00000504131 CHEK1O14757 476 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 DUS4LO95620 317 aaKnown RBP5.4□□□□□ -1.54
CLCN3-204ENST00000504131 GATA4P43694 442 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 C1orf174Q8IYL3 243 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 IL23AQ9NPF7 189 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 Q9Y3F1 56 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 ATRNL1Q5VV63 1379 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.4□□□□□ -1.54
CLCN3-204ENST00000504131 NDUFB6O95139 128 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 S100A4P26447 101 aaKnown RBP5.4□□□□□ -1.54
CLCN3-204ENST00000504131 VDAC2P45880 294 aaPredicted RBP5.4□□□□□ -1.54
CLCN3-204ENST00000504131 PSG5Q15238 335 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 MS4A18Q3C1V0 323 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 DTWD1Q8N5C7 304 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 MUCL1Q96DR8 90 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 NRN1Q9NPD7 142 aa5.4□□□□□ -1.54
CLCN3-204ENST00000504131 ANKRD36CQ5JPF3 1778 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 ZCWPW2A0A1B0GU75 182 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 CRYM-AS1A6NIL9 109 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 TMEM212A6NML5 194 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 DAPP51397 102 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 CLDN15P56746 228 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 TIFABQ6ZNK6 161 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 DDIT4LQ96D03 193 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 CACNG5Q9UF02 275 aa5.4□□□□□ -1.55
CLCN3-204ENST00000504131 LOC102723996A0A087X1L8 192 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms