RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RNASE6Q93091 150 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 OR6C3Q9NZP0 311 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 KIAA1324LA8MWY0 1029 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 PVALBP20472 110 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 EDDM3BP56851 147 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 OR2C3Q8N628 320 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 UBAC2Q8NBM4 344 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM216AQ8WUB2 273 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 SMIM3Q9BZL3 60 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 MAGT1Q9H0U3 335 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM234AQ9H0X4 552 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 ZNF665Q9H7R5 613 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 RNF115Q9Y4L5 304 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM90A27PA6NNH2 459 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 DEFB108AA8MXU0 73 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 SSSCA1O60232 199 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 LOXL3P58215 753 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 MORN2Q502X0 79 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 UNQ6494/PRO21346Q6UXR6 183 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 ZNF808Q8N4W9 903 aaPredicted RBP17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 DEFB108BQ8NET1 73 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 RNF141Q8WVD5 230 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 ZCCHC14Q8WYQ9 949 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 LINC00052Q96N35 136 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 ARV1Q9H2C2 271 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 WFDC1Q9HC57 220 aa17.72■□□□□ 0.43
UBE2D3-216ENST00000503742 TEX46H3BTG2 121 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 YPEL1O60688 119 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 EPHA1P21709 976 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 ADORA2A-AS1P86434 159 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 EWSR1Q01844 656 aaKnown RBP eCLIP17.71■□□□□ 0.435e-7■■■■■ 34.3
UBE2D3-216ENST00000503742 NHLH2Q02577 135 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 EDARADDQ8WWZ3 215 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 NEUROG1Q92886 237 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 YPEL2Q96QA6 119 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 CCL13Q99616 98 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM212BQ9NTI7 297 aaPredicted RBP17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 LYRM2Q9NU23 88 aaPredicted RBP17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 PSG11Q9UQ72 335 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM24AA6NFZ4 105 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 ST8SIA5O15466 376 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 TMEM50AO95807 157 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 GYPAP02724 150 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 ID4P47928 161 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 BRWD1-AS2P59051 145 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 IZUMO4Q1ZYL8 232 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 C17orf58Q2M2W7 97 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 EGLN1Q9GZT9 426 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 CALYQ9NYX4 217 aa17.71■□□□□ 0.43
UBE2D3-216ENST00000503742 USF3Q68DE3 2245 aa17.71■□□□□ 0.42
UBE2D3-216ENST00000503742 ROS1P08922 2347 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 TANC2Q9HCD6 1990 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 LRRC30A6NM36 301 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 SIGLEC5O15389 551 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 LPAR6P43657 344 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 CATR1Q13166 79 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 LTC4SQ16873 150 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 EIF5AL1Q6IS14 154 aaKnown RBP17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 ZNF66Q6ZN08 573 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 TCTEX1D1Q8N7M0 179 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 RNASE11Q8TAA1 199 aaKnown RBP17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 LINC01560Q8TB33 94 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 SAP30LQ9HAJ7 183 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 COQ3Q9NZJ6 369 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 CACNG5Q9UF02 275 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 NDRG3Q9UGV2 375 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 NBEAQ8NFP9 2946 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 IGSF23A1L1A6 192 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 CHST1O43916 411 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 RAMP3O60896 148 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 CD3EP07766 207 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 AKR1C2P52895 323 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 PAX9P55771 341 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 ODF3L1Q8IXM7 274 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 FAM216BQ8N7L0 139 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 GNG12Q9UBI6 72 aa17.7■□□□□ 0.42
UBE2D3-216ENST00000503742 SMG1Q96Q15 3661 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 GRNP28799 593 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 APOBEC3AP31941 199 aaPredicted RBP17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 VAMP2P63027 116 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 EFNB3Q15768 340 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 MST1LQ2TV78 715 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 TCF23Q7RTU1 214 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 FGFRL1Q8N441 504 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 TMEM252Q8N6L7 170 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 HSD17B10Q99714 261 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 ATRXP46100 2492 aa17.69■□□□□ 0.42
UBE2D3-216ENST00000503742 LGALS8O00214 317 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 NXPH3O95157 252 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 CLDN1O95832 211 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 CAV2P51636 162 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 SWI5Q1ZZU3 235 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 TUSC1Q2TAM9 212 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 BTNL3Q6UXE8 466 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 SLC25A31Q9H0C2 315 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 RAB9BQ9NP90 201 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 NCOR2Q9Y618 2525 aa17.68■□□□□ 0.42
UBE2D3-216ENST00000503742 KBTBD11-OT1A0A1B0GTJ5 212 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms