RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 RAB5CP51148 216 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 MRGPRGQ86SM5 289 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 ZGRF1Q86YA3 2104 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 SVBPQ8N300 66 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 SEC11CQ9BY50 192 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 STRAPQ9Y3F4 350 aaKnown RBP18.76■□□□□ 0.59
PCDH1-204ENST00000503492 RP1L1Q8IWN7 2480 aaPredicted RBP18.76■□□□□ 0.59
PCDH1-204ENST00000503492 C9JQL5 133 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 TXNL1O43396 289 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 PRH1P02810 166 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 RPL23AP62750 156 aaKnown RBP18.76■□□□□ 0.59
PCDH1-204ENST00000503492 OR2B11Q5JQS5 317 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 SNX22Q96L94 193 aa18.76■□□□□ 0.59
PCDH1-204ENST00000503492 SEBOXQ9HB31 216 aaPredicted RBP18.76■□□□□ 0.59
PCDH1-204ENST00000503492 MED19A0JLT2 244 aaPredicted RBP18.75■□□□□ 0.59
PCDH1-204ENST00000503492 FAM74A7A6NL05 159 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 DEFB108AA8MXU0 73 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 SYNGR2O43760 224 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 TSPAN15O95858 294 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 CD80P33681 288 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 RPS23P62266 143 aaKnown RBP18.75■□□□□ 0.59
PCDH1-204ENST00000503492 FAM74A3Q4VXF1 159 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 TRAT1Q6PIZ9 186 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 BSNQ9UPA5 3926 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 LOC105371267A0A1B0GV96 52 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 K7N7A8 449 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 SPINT2O43291 252 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 BRWD1-AS2P59051 145 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 BTNL3Q6UXE8 466 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 GFRALQ6UXV0 394 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 OR2G3Q8NGZ4 309 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 SH3BGRL2Q9UJC5 107 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 WSB1Q9Y6I7 421 aa18.75■□□□□ 0.59
PCDH1-204ENST00000503492 CUL9Q8IWT3 2517 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 ODAMA1E959 279 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 F12P00748 615 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-204ENST00000503492 IAPPP10997 89 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 SNCAP37840 140 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 DVL1P1P54792 670 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-204ENST00000503492 HTD2P86397 168 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 TAGLNQ01995 201 aaKnown RBP18.74■□□□□ 0.59
PCDH1-204ENST00000503492 TMEM267Q0VDI3 215 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-204ENST00000503492 MSMO1Q15800 293 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 FAM201AQ5SY85 155 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 ZNRF1Q8ND25 227 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 MMP24Q9Y5R2 645 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 FAM157AC9JC47 383 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 MGST3O14880 152 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 ST8SIA5O15466 376 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 ZNF816Q0VGE8 651 aaPredicted RBP18.74■□□□□ 0.59
PCDH1-204ENST00000503492 LTC4SQ16873 150 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 ATP5SQ99766 215 aa18.74■□□□□ 0.59
PCDH1-204ENST00000503492 C17orf98A8MV24 154 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 K7ENP7 123 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 GATA4P43694 442 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 SULT1A1P50225 295 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 STX12Q86Y82 276 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 AGMATQ9BSE5 352 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 PSG11Q9UQ72 335 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 USF3Q68DE3 2245 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 DIDO1Q9BTC0 2240 aaKnown RBP18.73■□□□□ 0.59
PCDH1-204ENST00000503492 IGHV1-46P01743 117 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 ADH4P08319 380 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 SFTA3P0C7M3 94 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 CATR1Q13166 79 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 PPP1R35Q8TAP8 253 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 FAM213BQ8TBF2 198 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 TCTEX1D2Q8WW35 142 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 SCRT1Q9BWW7 348 aa18.73■□□□□ 0.59
PCDH1-204ENST00000503492 MAP1BP46821 2468 aaKnown RBP18.72■□□□□ 0.59
PCDH1-204ENST00000503492 TRIM77I1YAP6 450 aa18.72■□□□□ 0.59
PCDH1-204ENST00000503492 GZMHP20718 246 aa18.72■□□□□ 0.59
PCDH1-204ENST00000503492 SELENOVP59797 346 aa18.72■□□□□ 0.59
PCDH1-204ENST00000503492 PRR30Q53SZ7 412 aaPredicted RBP18.72■□□□□ 0.59
PCDH1-204ENST00000503492 ABHD14AQ9BUJ0 271 aa18.72■□□□□ 0.59
PCDH1-204ENST00000503492 PSENENQ9NZ42 101 aa18.72■□□□□ 0.59
PCDH1-204ENST00000503492 C16orf97H3BN30 126 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 TOR1AO14656 332 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 CLDN1O95832 211 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 KRASP01116 189 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 P0C879 139 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 G6PCP35575 357 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 LINC00205P59089 165 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 RUNX1Q01196 453 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 CR1LQ2VPA4 569 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 GCM1Q9NP62 436 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 KCNJ16Q9NPI9 418 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 COA4Q9NYJ1 87 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 ELOVL5Q9NYP7 299 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 ZNF835Q9Y2P0 537 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 ICE1Q9Y2F5 2266 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 DCHS1Q96JQ0 3298 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 S1PR2O95136 353 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 TNFAIP6P98066 277 aaPredicted RBP18.71■□□□□ 0.59
PCDH1-204ENST00000503492 COMMD1Q8N668 190 aa18.71■□□□□ 0.59
PCDH1-204ENST00000503492 SNRNP40Q96DI7 357 aaKnown RBP18.71■□□□□ 0.59
PCDH1-204ENST00000503492 LINC00473A8K010 186 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 Q3ZCU0 254 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 NUP37Q8NFH4 326 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 IL19Q9UHD0 177 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms