RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 C17orf58Q2M2W7 97 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 THOC7Q6I9Y2 204 aaKnown RBP18.24■□□□□ 0.51
PTPN13-205ENST00000502971 ITLN2Q8WWU7 325 aaPredicted RBP18.24■□□□□ 0.51
PTPN13-205ENST00000502971 ABHD14BQ96IU4 210 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 CLN8Q9UBY8 286 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 NSG2Q9Y328 171 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 POMT1Q9Y6A1 747 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 RAI1Q7Z5J4 1906 aaPredicted RBP18.24■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF729A6NN14 1252 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 TNFRSF13BO14836 293 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ADAM20O43506 726 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 SLC25A6P12236 298 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 LOXL3P58215 753 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 CATR1Q13166 79 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 LTC4SQ16873 150 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 TMEM30BQ3MIR4 351 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 CLLU1Q5K131 121 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 FAM219AQ8IW50 185 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 SCARB1Q8WTV0 552 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ST8SIA2Q92186 375 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 AGMATQ9BSE5 352 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF462Q96JM2 2506 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ITGB1BP1O14713 200 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ZG16O60844 167 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 RAB14P61106 215 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 TCTEX1D1Q8N7M0 179 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 LSM10Q969L4 123 aaKnown RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF471Q9BX82 626 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 GSX2Q9BZM3 304 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 LINC00574Q9H8X3 128 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 PLEKHA2Q9HB19 425 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 FAM212BQ9NTI7 297 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 SLC25A10Q9UBX3 287 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-205ENST00000502971 PSG11Q9UQ72 335 aa18.23■□□□□ 0.51
PTPN13-205ENST00000502971 TANC2Q9HCD6 1990 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 hADV38S2A0JD32 116 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 MSGN1A6NI15 193 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 F5H0A9 414 aaPredicted RBP18.22■□□□□ 0.51
PTPN13-205ENST00000502971 SPDEFO95238 335 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 HKR1P10072 659 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF16P17020 682 aaPredicted RBP18.22■□□□□ 0.51
PTPN13-205ENST00000502971 HFEQ30201 348 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF585BQ52M93 769 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 ZNF66Q6ZN08 573 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 C5orf30Q96GV9 206 aa18.22■□□□□ 0.51
PTPN13-205ENST00000502971 ST8SIA5O15466 376 aa18.21■□□□□ 0.51
PTPN13-205ENST00000502971 NDUFA2O43678 99 aa18.21■□□□□ 0.51
PTPN13-205ENST00000502971 NDUFB7P17568 137 aa18.21■□□□□ 0.51
PTPN13-205ENST00000502971 MEF2CQ06413 473 aaPredicted RBP18.21■□□□□ 0.51
PTPN13-205ENST00000502971 HSD17B10Q99714 261 aaKnown RBP18.21■□□□□ 0.51
PTPN13-205ENST00000502971 SDHAF2Q9NX18 166 aa18.21■□□□□ 0.51
PTPN13-205ENST00000502971 GFOD1Q9NXC2 390 aa18.21■□□□□ 0.51
PTPN13-205ENST00000502971 A0A1B0GU03 582 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 IGKV1-39P01597 117 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 IGKV1D-39P04432 117 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 RPL12P30050 165 aaKnown RBP18.2■□□□□ 0.5
PTPN13-205ENST00000502971 NKX2-1P43699 371 aaPredicted RBP18.2■□□□□ 0.5
PTPN13-205ENST00000502971 TCF23Q7RTU1 214 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 TAS2R3Q9NYW6 316 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 KAAG1Q9UBP8 84 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 LINC00312Q9Y6C7 94 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 RPS10-NUDT3A0A1W2PQS6 291 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 TAAR5O14804 337 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 GPR12P47775 334 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 P2RY1P47900 373 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 STOML3Q8TAV4 291 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 GPR146Q96CH1 333 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 PHYHIPLQ96FC7 376 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 CBLN4Q9NTU7 201 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 IDI2-AS1Q9NZ38 188 aa18.2■□□□□ 0.5
PTPN13-205ENST00000502971 RCL1Q9Y2P8 373 aaKnown RBP18.2■□□□□ 0.5
PTPN13-205ENST00000502971 NDUFB3O43676 98 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 FSTL3O95633 263 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 S100A1P23297 94 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 RAB7AP51149 207 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 ID3Q02535 119 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 LRRC10Q5BKY1 277 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 ALKAL2Q6UX46 152 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 RNASE11Q8TAA1 199 aaKnown RBP18.19■□□□□ 0.5
PTPN13-205ENST00000502971 ZC4H2Q9NQZ6 224 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 LPAR3Q9UBY5 353 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 GAB2Q9UQC2 676 aa18.19■□□□□ 0.5
PTPN13-205ENST00000502971 ARFGEF3Q5TH69 2177 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 ANKHD1Q8IWZ3 2542 aaKnown RBP18.18■□□□□ 0.5
PTPN13-205ENST00000502971 LINC00862A6NCI5 91 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 CLDN1O95832 211 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 OMGP23515 440 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 RPL30P62888 115 aaKnown RBP18.18■□□□□ 0.5
PTPN13-205ENST00000502971 GPR157Q5UAW9 335 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 DMBX1Q8NFW5 382 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 OR10A7Q8NGE5 316 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 PITX3O75364 302 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 ATG12O94817 140 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 PVALBP20472 110 aaPredicted RBP18.18■□□□□ 0.5
PTPN13-205ENST00000502971 LPAR6P43657 344 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 Q3ZCU0 254 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 TCTEX1D2Q8WW35 142 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 RAB1BQ9H0U4 201 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 GAL3ST2Q9H3Q3 398 aa18.18■□□□□ 0.5
PTPN13-205ENST00000502971 CYTL1Q9NRR1 136 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms