RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 LIPKQ5VXJ0 399 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 TMEM203Q969S6 136 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
HDLBP-247ENST00000498595 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 TMEM14DPA8MWL7 114 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 G3V318 75 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 RBBP9O75884 186 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 PSMA1P25786 263 aaKnown RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 CNTFRP26992 372 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 CD40LGP29965 261 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 INSL3P51460 131 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 MRPS15P82914 257 aaKnown RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 TMEM267Q0VDI3 215 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 FHL3Q13643 280 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 P2RY14Q15391 338 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 RAB11BQ15907 218 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 NPBQ8NG41 125 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 OR5B12Q96R08 314 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 CCDC90BQ9GZT6 254 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 C12orf4Q9NQ89 552 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
HDLBP-247ENST00000498595 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
HDLBP-247ENST00000498595 SLC17A2O00624 439 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 RRHO14718 337 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 RGS10O43665 173 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 NDUFA3O95167 84 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 LY86O95711 162 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
HDLBP-247ENST00000498595 CEACAM6P40199 344 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 RAB9AP51151 201 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 HLA-DRB3P79483 266 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 RUNX1Q01196 453 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF880Q6PDB4 577 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF491Q8N8L2 437 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 RITA1Q96K30 269 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 WWC2-AS2Q96NR7 200 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 PRR25Q96S07 402 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 LPAR5Q9H1C0 372 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF221Q9UK13 617 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-247ENST00000498595 A3GALT2U3KPV4 340 aa11.29□□□□□ -0.6
HDLBP-247ENST00000498595 TRBV6-6A0A0A6YYG2 114 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 A0A1W2PN81 502 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 CHRNA7P36544 502 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 PSMD7P51665 324 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 QRFPP83859 136 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 PYHIN1Q6K0P9 492 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 ABHD14BQ96IU4 210 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 TSNAXQ99598 290 aaKnown RBP11.28□□□□□ -0.6
HDLBP-247ENST00000498595 RNF5Q99942 180 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
HDLBP-247ENST00000498595 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 ISYNA1Q9NPH2 558 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
HDLBP-247ENST00000498595 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-247ENST00000498595 I3L521 148 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 SOCS1O15524 211 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 APOA2P02652 100 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 CT45A6P0DMU7 189 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 CT45A5P0DMU8 189 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 CT45A7P0DMV0 189 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 CPEP16870 476 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
HDLBP-247ENST00000498595 VEGFCP49767 419 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 AQP4P55087 323 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-247ENST00000498595 TPBGQ13641 420 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 ZNF429Q86V71 674 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 C11orf54Q9H0W9 315 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-247ENST00000498595 VCX3BQ9H321 246 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
HDLBP-247ENST00000498595 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
HDLBP-247ENST00000498595 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.61
HDLBP-247ENST00000498595 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 ANKRD65E5RJM6 399 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 258.8 ms