RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 C22orf42Q6IC83 251 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 MRPL41Q8IXM3 137 aaKnown RBP12.65□□□□□ -0.38
NR1H3-227ENST00000498548 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 MRAPQ8TCY5 172 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF251Q9BRH9 671 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 RIMS4Q9H426 269 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-227ENST00000498548 ZFP57Q9NU63 452 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-227ENST00000498548 RAB22AQ9UL26 194 aa12.65□□□□□ -0.38
NR1H3-227ENST00000498548 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 TRDV1A0A1B0GX56 115 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 CT45A6P0DMU7 189 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 CT45A5P0DMU8 189 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 CT45A7P0DMV0 189 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 MYL9P24844 172 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 THBS3P49746 956 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 PSMD7P51665 324 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 TEX38Q6PEX7 206 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 CD200R1LQ6Q8B3 271 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 FAM131AQ6UXB0 335 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 MOB1BQ7L9L4 216 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 SPARTQ8N0X7 666 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 C11orf54Q9H0W9 315 aaPredicted RBP12.64□□□□□ -0.39
NR1H3-227ENST00000498548 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 KCNK7Q9Y2U2 307 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
NR1H3-227ENST00000498548 A0A075B6Q4 140 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 RAB29O14966 203 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 HSPA12AO43301 675 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 CD3GP09693 182 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 RAB3BP20337 219 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 PSMB9P28065 219 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
NR1H3-227ENST00000498548 LINC00205P59089 165 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 COMMD1Q8N668 190 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 KCTD7Q96MP8 289 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
NR1H3-227ENST00000498548 IFITM5A6NNB3 132 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 G3V318 75 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 NBR2O15453 112 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 SNRPBP14678 240 aaKnown RBP12.62□□□□□ -0.39
NR1H3-227ENST00000498548 GNB3P16520 340 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 VDAC1P21796 283 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 ZBTB25P24278 435 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 CFHR3Q02985 330 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 CXorf66Q5JRM2 361 aaPredicted RBP12.62□□□□□ -0.39
NR1H3-227ENST00000498548 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 DRAXINQ8NBI3 349 aaPredicted RBP12.62□□□□□ -0.39
NR1H3-227ENST00000498548 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 RAB3CQ96E17 227 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
NR1H3-227ENST00000498548 RAX2Q96IS3 184 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
NR1H3-227ENST00000498548 TGP01266 2768 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 TRDCB7Z8K6 153 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 MRPS14O60783 128 aaKnown RBP12.61□□□□□ -0.39
NR1H3-227ENST00000498548 PROP1O75360 226 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 GSTT2P0CG29 244 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 GSTT2BP0CG30 244 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 MYCNOSP40205 109 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 RAB25P57735 213 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 FOXE3Q13461 319 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 C5orf64Q2M2E5 130 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 P2RX4Q99571 388 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 GON7Q9BXV9 100 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 FBXL15Q9H469 300 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 Q9H521 79 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 PARP11Q9NR21 331 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 TXNL4BQ9NX01 149 aaKnown RBP12.61□□□□□ -0.39
NR1H3-227ENST00000498548 KIAA1456Q9P272 454 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 ZNF230Q9UIE0 474 aaPredicted RBP12.61□□□□□ -0.39
NR1H3-227ENST00000498548 ELF5Q9UKW6 265 aaPredicted RBP12.61□□□□□ -0.39
NR1H3-227ENST00000498548 MGAT4AQ9UM21 535 aa12.61□□□□□ -0.39
NR1H3-227ENST00000498548 H0YJW9 148 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 H7C2Y5 167 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 CCL24O00175 119 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 ITGB1BP1O14713 200 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 IGHG4P01861 327 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 IGF1P05019 195 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 ELANEP08246 267 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 IGSF11Q5DX21 431 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 LIN54Q6MZP7 749 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 FAM71F2Q6NXP2 309 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 NPBQ8NG41 125 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 OR51J1Q9H342 316 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms