RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 F6UZH7 168 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 CD38P28907 300 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 S100GP29377 79 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 OTX2P32243 289 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 CDKN1BP46527 198 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 SERF2P84101 59 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 CLEC18CQ8NCF0 446 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 OR2M3Q8NG83 312 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 TYMSP04818 313 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 FRMD6-AS1P0C7T7 363 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 UCP1P25874 307 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 PAFAH1B2P68402 229 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 LCN2P80188 198 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 C17orf67Q0P5P2 114 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF295-AS1Q8N0V1 137 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 TP53TG3Q9ULZ0 132 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 PGLYRP1O75594 196 aaPredicted RBP11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 ZXDAP98168 799 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 LINC01551Q86U37 167 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 ST8SIA1Q92185 356 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 SPTSSAQ969W0 71 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 METTL7AQ9H8H3 244 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 TBL2Q9Y4P3 447 aaKnown RBP11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 KIR2DS5A0A0G2JLQ3 304 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 A0A0G2JNG1 304 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 LOC102725191A0A1B0GVB3 256 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 SNURFLB1AK76 121 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 KIR2DS3K7RE56 304 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 HYPMO75409 117 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 NPPCP23582 126 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 UBE2NP61088 152 aaKnown RBP11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 KIR2DS5Q14953 304 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 Q6ZS52 159 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 IL36RNQ9UBH0 155 aa11.15□□□□□ -0.62
GAPVD1-220ENST00000497580 BLACEA4D250 179 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 NPIPA2E9PIF3 369 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 FBLN7Q53RD9 439 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 FAM19A2Q8N3H0 131 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 OR5D13Q8NGL4 314 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 ELOVL5Q9NYP7 299 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 CBR3O75828 277 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 RBFOX2O43251 390 aaKnown RBP eCLIP11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 YPEL1O60688 119 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 CCNOP22674 350 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 F2RP25116 425 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 PHYHD1Q5SRE7 291 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 ZNF596Q8TC21 504 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 SPSB1Q96BD6 273 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 YPEL2Q96QA6 119 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
GAPVD1-220ENST00000497580 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 G3V3Y1 287 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 LINC00310P59036 64 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 PRAMEF20Q5VT98 475 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 LOXL4Q96JB6 756 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 AQP7P3A6NL99 342 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 WDR1O75083 606 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 TFF3Q07654 80 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 KMT5CQ86Y97 462 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 RDH5Q92781 318 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 GPR27Q9NS67 375 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 CPAMD8Q8IZJ3 1885 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 TRAV38-1A0A0B4J264 116 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 A0A0U1RQV5 110 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 HS3ST1O14792 307 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 FBLP22087 321 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 GNB1P62873 340 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 ZNF784Q8NCA9 323 aaPredicted RBP11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 ABHD14BQ96IU4 210 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 PTRH2Q9Y3E5 179 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 NCOR1O75376 2440 aa11.13□□□□□ -0.63
GAPVD1-220ENST00000497580 KRASP01116 189 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 RNF2Q99496 336 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 WDFY4Q6ZS81 3184 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 GVINP1Q7Z2Y8 2422 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 TUSC2O75896 110 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 WNT2P09544 360 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 TCL1AP56279 114 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 HTD2P86397 168 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 KCNMB1Q16558 191 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 TMEM211Q6ICI0 200 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms