RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	CCDC144NL	Q6NUI1	221 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	GLIPR1L1	Q6UWM5	242 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	UNQ9370/PRO34162	Q6UXP9	181 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC16A12	Q6ZSM3	486 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF833P	Q6ZTB9	187 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC35E3	Q7Z769	313 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	LINC00596	Q86U02	117 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR52L2P	Q8NGH6	319 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CHPT1	Q8WUD6	406 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CYGB	Q8WWM9	190 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	PRR25	Q96S07	402 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	NICN1	Q9BSH3	213 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	DCLRE1B	Q9H816	532 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM138	Q9NPI0	162 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	PCDHB16	Q9NRJ7	776 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	BABAM2	Q9NXR7	383 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	GLS2	Q9UI32	602 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	PSORS1C1	Q9UIG5	152 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	ING4	Q9UNL4	249 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	GAB2	Q9UQC2	676 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	HECTD4	Q9Y4D8	3996 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SAA2-SAA4	A0A096LPE2	208 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGKV1-6	A0A0C4DH72	117 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM90A10P	A6NDY2	464 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM14DP	A8MWL7	114 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	AIP	O00170	330 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	LANCL1	O43813	399 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	NAPSA	O96009	420 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGF1	P05019	195 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM106CP	P0CH98	169 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	SAA2	P0DJI9	122 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC2A2	P11168	524 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MGMT	P16455	207 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MAL	P21145	153 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MYF6	P23409	242 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	CD1B	P29016	333 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	BLVRB	P30043	206 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	PPP1CC	P36873	323 aa	Known RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MYCNOS	P40205	109 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MNDA	P41218	407 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	CRIP2	P52943	208 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	LINC00205	P59089	165 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	ST3GAL4	Q11206	333 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	HES1	Q14469	280 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368		Q3ZCU0	254 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	CD300E	Q496F6	205 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MORN2	Q502X0	79 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	YIF1B	Q5BJH7	314 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	VAX1	Q5SQQ9	334 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	ATAD3C	Q5T2N8	411 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	SYT6	Q5T7P8	510 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	MOB3B	Q86TA1	216 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF695	Q8IW36	515 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR10X1	Q8NGY0	326 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	HAVCR2	Q8TDQ0	301 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	CASTOR1	Q8WTX7	329 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	STMN2	Q93045	179 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	CREB3L1	Q96BA8	519 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	AKR1E2	Q96JD6	320 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368		Q96MT0	163 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	GPER1	Q99527	375 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	TM2D1	Q9BX74	207 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	ALX4	Q9H161	411 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	METTL9	Q9H1A3	318 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	TAF9B	Q9HBM6	251 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	ORC6	Q9Y5N6	252 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	TNC	P24821	2201 aa		4.25	□□□□□ -1.73
UBE3C-208	ENST00000497368	SORL1	Q92673	2214 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM90A7P	A6NKC0	464 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM90A23P	A8MXZ1	464 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	CCL24	O00175	119 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	AP4M1	O00189	453 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	PDCD6	O75340	191 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	PEX14	O75381	377 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	RBMXL2	O75526	392 aa	Known RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	MOS	P00540	346 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	HLA-DRB1	P01911	266 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	MAS1	P04201	325 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	GAPDH	P04406	335 aa	Known RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	CD2	P06729	351 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	OCM	P0CE72	109 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	GTF2F2	P13984	249 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	HTR2C	P28335	458 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	CDX1	P47902	265 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	WNT4	P56705	351 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	PPP3R1	P63098	170 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	RUNX1	Q01196	453 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	GPR50	Q13585	617 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	KIR2DS1	Q14954	304 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	RCN1	Q15293	331 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	RPL39P5	Q59GN2	51 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	LY6G6F	Q5SQ64	297 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	C1orf100	Q5SVJ3	147 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	AWAT2	Q6E213	333 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM131A	Q6UXB0	335 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM91	Q6ZNR0	172 aa		4.24	□□□□□ -1.73

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