RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 OR8U8P0C7N1 319 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 SRMP19623 302 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 HTR2CP28335 458 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 KIAA0141Q14154 515 aaPredicted RBP13.35□□□□□ -0.27
SMC4-226ENST00000497311 MED22Q15528 200 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 HSD17B12Q53GQ0 312 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 NICN1Q9BSH3 213 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 IFI27L2Q9H2X8 130 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 GNB4Q9HAV0 340 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 I3L521 148 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 RAB29O14966 203 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 ST8SIA5O15466 376 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 NDUFA3O95167 84 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 NAPSAO96009 420 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 BLVRBP30043 206 aaPredicted RBP13.34□□□□□ -0.27
SMC4-226ENST00000497311 RAB9AP51151 201 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 RUNX1Q01196 453 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 ZNF616Q08AN1 781 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 ZNF880Q6PDB4 577 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 PRSS48Q7RTY5 328 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 SETD6Q8TBK2 473 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 OR5B12Q96R08 314 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
SMC4-226ENST00000497311 TMEM14DPA8MWL7 114 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 SLC22A1O15245 554 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 INSL3P51460 131 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 UNC119Q13432 240 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 MOB1BQ7L9L4 216 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 MINDY2Q8NBR6 621 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 OR6M1Q8NGM8 313 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 RIMS4Q9H426 269 aaPredicted RBP13.33□□□□□ -0.28
SMC4-226ENST00000497311 SLC23A1Q9UHI7 598 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
SMC4-226ENST00000497311 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
SMC4-226ENST00000497311 RRP15Q9Y3B9 282 aaKnown RBP13.33□□□□□ -0.28
SMC4-226ENST00000497311 OR5H14A6NHG9 310 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 BPNT1O95861 308 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 CT45A6P0DMU7 189 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 CT45A5P0DMU8 189 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 CT45A7P0DMV0 189 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 CD37P11049 281 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 GNB1P62873 340 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 QRFPP83859 136 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 PLGLAQ15195 96 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 RPL39P5Q59GN2 51 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 ZNF660Q6AZW8 331 aaPredicted RBP13.32□□□□□ -0.28
SMC4-226ENST00000497311 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 ISYNA1Q9NPH2 558 aa13.32□□□□□ -0.28
SMC4-226ENST00000497311 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 A0A1W2PN81 502 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 RRHO14718 337 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
SMC4-226ENST00000497311 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
SMC4-226ENST00000497311 UCHL1P09936 223 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 MC5RP33032 325 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 CHRNA7P36544 502 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 NDPQ00604 133 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 TPBGQ13641 420 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 LIPKQ5VXJ0 399 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 GLDNQ6ZMI3 551 aaPredicted RBP13.31□□□□□ -0.28
SMC4-226ENST00000497311 UFD1Q92890 307 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 ABHD14BQ96IU4 210 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 URM1Q9BTM9 101 aaKnown RBP13.31□□□□□ -0.28
SMC4-226ENST00000497311 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 FBXL15Q9H469 300 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 Q9H521 79 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 U3KQK5 164 aa13.31□□□□□ -0.28
SMC4-226ENST00000497311 A0A0A6YYD4 124 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 H0YJW9 148 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 H7C2Y5 167 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 ITGB1BP1O14713 200 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 SOCS1O15524 211 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 LY86O95711 162 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 ARSBP15848 533 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 CRIP2P52943 208 aaPredicted RBP13.3□□□□□ -0.28
SMC4-226ENST00000497311 CX3CL1P78423 397 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
SMC4-226ENST00000497311 MLLT11Q13015 90 aaPredicted RBP13.3□□□□□ -0.28
SMC4-226ENST00000497311 TCTEX1D1Q8N7M0 179 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 AGMATQ9BSE5 352 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 PARP12Q9H0J9 701 aaKnown RBP13.3□□□□□ -0.28
SMC4-226ENST00000497311 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 AK3Q9UIJ7 227 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 MGAT4AQ9UM21 535 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
SMC4-226ENST00000497311 WASHC3Q9Y3C0 194 aa13.3□□□□□ -0.28
SMC4-226ENST00000497311 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms