RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 BPIFA2Q96DR5 249 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 PERPQ96FX8 193 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 SLC25A44Q96H78 314 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 SAMD8Q96LT4 415 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ADAD1Q96M93 576 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 AQP10Q96PS8 301 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 DERL3Q96Q80 235 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF2Q9BSG1 426 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 MRPL13Q9BYD1 178 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ULBP2Q9BZM5 246 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 EIF5A2Q9GZV4 153 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FAM234AQ9H0X4 552 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 SLC35B3Q9H1N7 401 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 METTL8Q9H825 291 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 TAF9BQ9HBM6 251 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 OBP2BQ9NPH6 170 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FAM212BQ9NTI7 297 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 KCNG2Q9UJ96 466 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 MOKQ9UQ07 419 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 LAMP3Q9UQV4 416 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CHD3Q12873 2000 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CELSR1Q9NYQ6 3014 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 A0A0A6YYH2 397 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 BORCS7-ASMTA0A0B4J1R7 106 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 KIR2DL5BA0A0G2JN68 375 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 KIR2DL5BA0A0G2JPC4 375 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 TRBV2A0A0J9YWF9 115 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 A0A1B0GW64 132 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 FAM90A10PA6NDY2 464 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 A6NJ64 397 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 NPIPB13A6NJU9 1138 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PRSS47A8MTI9 375 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF705GA8MUZ8 300 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 B4DEV8 164 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 NPIPB4C9JG80 1138 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 K7EPK0 472 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CCSO14618 274 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 DHHO43323 396 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BKO60814 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SMPD2O60906 423 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR6A2O95222 327 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 DIRAS3O95661 229 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PPP1R3DO95685 299 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CST4P01036 141 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 IGHMP01871 453 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HLA-HP01893 362 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 GAPDHP04406 335 aaKnown RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ARG1P05089 322 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BJP06899 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 FCGR3AP08637 254 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PATE4P0C8F1 98 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 FAM157CP0CG43 387 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SLC2A5P22732 501 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BOP23527 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PYCR1P32322 319 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BBP33778 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SNCAP37840 140 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 LPAR6P43657 344 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CSNK1A1P48729 337 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CAMLGP49069 296 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CLDN12P56749 244 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BDP58876 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ERVFC1-1P60608 527 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BCP62807 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 FMODQ06828 376 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PLA2G7Q13093 441 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST2H2BEQ16778 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ODF4Q2M2E3 257 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ALG10Q5BKT4 473 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 COL5A1-AS1Q5SY13 56 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 C10orf128Q5T292 105 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 PRSS57Q6UWY2 283 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 BTNL3Q6UXE8 466 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 MBOAT2Q6ZWT7 520 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 MDP1Q86V88 176 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF584Q8IVC4 421 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 KIR2DL5AQ8N109 375 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 FAM71E2Q8N5Q1 922 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 BBS1Q8NFJ9 593 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR8G5Q8NG78 346 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR13C2Q8NGS9 318 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR51F2Q8NH61 342 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR51A7Q8NH64 312 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF519Q8TB69 540 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 MITD1Q8WV92 249 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BHQ93079 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 MCHR2Q969V1 340 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 TMEM18Q96B42 140 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 YPEL4Q96NS1 127 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 TSPAN32Q96QS1 320 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 CNN2Q99439 309 aaKnown RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 GPA33Q99795 319 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BNQ99877 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BMQ99879 126 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 URM1Q9BTM9 101 aaKnown RBP4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SELENOIQ9C0D9 397 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms