RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ATP6V1G2-DDX39BF2Z307 99 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 TOR1AO14656 332 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 IAPPP10997 89 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 TAS2R30P59541 319 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 HTD2P86397 168 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 RUNX1Q01196 453 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 TMEM88Q6PEY1 159 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 VHLLQ6RSH7 139 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 FGFRL1Q8N441 504 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 TCTEX1D1Q8N7M0 179 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 PPP1R35Q8TAP8 253 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 EIF5A2Q9GZV4 153 aaKnown RBP10.9□□□□□ -0.66
GARNL3-220ENST00000496711 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 USF3Q68DE3 2245 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 DIDO1Q9BTC0 2240 aaKnown RBP10.9□□□□□ -0.66
GARNL3-220ENST00000496711 AKAP13Q12802 2813 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 GVINP1Q7Z2Y8 2422 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 ZFHX2Q9C0A1 2572 aaPredicted RBP10.9□□□□□ -0.67
GARNL3-220ENST00000496711 IGHV3-43A0A0B4J1X8 118 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 MED19A0JLT2 244 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-220ENST00000496711 C15orf65H3BRN8 121 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 RAMP3O60896 148 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 IFNA5P01569 189 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 ADH4P08319 380 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 IGHV3-43DP0DP04 118 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 RPL30P62888 115 aaKnown RBP10.89□□□□□ -0.67
GARNL3-220ENST00000496711 OR2B11Q5JQS5 317 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 MOGAT3Q86VF5 341 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 CBLN2Q8IUK8 224 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 TCTEX1D2Q8WW35 142 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 SNX22Q96L94 193 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 KCNJ16Q9NPI9 418 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 DSCAML1Q8TD84 2053 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 CADP27708 2225 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 IGHV3OR15-7A0A075B7D8 119 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 A0A1B0GW64 132 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 ODAMA1E959 279 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 A8MXE2 369 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 MGST3O14880 152 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 SPRY3O43610 288 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 P0C879 139 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 BMP5P22003 454 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 ZNF816Q0VGE8 651 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-220ENST00000496711 SPRNQ5BIV9 151 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 SLC25A24Q6NUK1 477 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 ITLN1Q8WWA0 313 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 LRFN3Q9BTN0 628 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
GARNL3-220ENST00000496711 CACNA1DQ01668 2161 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 BTBD17A6NE02 478 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 S1PR2O95136 353 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 CLDN1O95832 211 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 G6PCP35575 357 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 HBG1P69891 147 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 HBG2P69892 147 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 FAM27E3Q08E93 113 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 Q3ZCU0 254 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 EDARADDQ8WWZ3 215 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 ABHD17AQ96GS6 310 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
GARNL3-220ENST00000496711 JPT1Q9UK76 154 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 PSG11Q9UQ72 335 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 TP53TG5Q9Y2B4 290 aa10.88□□□□□ -0.67
GARNL3-220ENST00000496711 A0A1B0GV50 99 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 C17orf98A8MV24 154 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 PRRG2O14669 202 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 METTL15P1P0C7V9 234 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 CCKARP32238 428 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 GATA4P43694 442 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 UBE2KP61086 200 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 MRGPRGQ86SM5 289 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 FAM216AQ8WUB2 273 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 MRPL37Q9BZE1 423 aaKnown RBP10.87□□□□□ -0.67
GARNL3-220ENST00000496711 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 NDRG3Q9UGV2 375 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 LAMP3Q9UQV4 416 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 DSCAMO60469 2012 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 MEX3AA1L020 520 aaKnown RBP10.87□□□□□ -0.67
GARNL3-220ENST00000496711 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 GPR37O15354 613 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 CLDN14O95500 239 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 KRASP01116 189 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 LHBP01229 141 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 GZMHP20718 246 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 CD40P25942 277 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 SELENOVP59797 346 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms