RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 RAMP3O60896 148 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 NAPSAO96009 420 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 UCHL1P09936 223 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 HSMCR30P0CW71 290 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 PPIFP30405 207 aaKnown RBP10.09□□□□□ -0.79
FN1-226ENST00000496542 ECI1P42126 302 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 QRFPP83859 136 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 LIN54Q6MZP7 749 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 FAM71F2Q6NXP2 309 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 MYOZ3Q8TDC0 251 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 HDHD3Q9BSH5 251 aaPredicted RBP10.09□□□□□ -0.79
FN1-226ENST00000496542 PARP12Q9H0J9 701 aaKnown RBP10.09□□□□□ -0.79
FN1-226ENST00000496542 PLGRKTQ9HBL7 147 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.09□□□□□ -0.79
FN1-226ENST00000496542 SLC23A1Q9UHI7 598 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 AK3Q9UIJ7 227 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 VSIG4Q9Y279 399 aa10.09□□□□□ -0.79
FN1-226ENST00000496542 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
FN1-226ENST00000496542 RAB29O14966 203 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 SOCS1O15524 211 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 AQP4P55087 323 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 RPS25P62851 125 aaKnown RBP10.08□□□□□ -0.8
FN1-226ENST00000496542 GNB1P62873 340 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 NDPQ00604 133 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 IRF3Q14653 427 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 PLGLAQ15195 96 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 ZNF260Q3ZCT1 412 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 ZNF880Q6PDB4 577 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 GLDNQ6ZMI3 551 aaPredicted RBP10.08□□□□□ -0.8
FN1-226ENST00000496542 ZNF491Q8N8L2 437 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 NPBQ8NG41 125 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 OR1N2Q8NGR9 330 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 ABHD5Q8WTS1 349 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 ABHD14BQ96IU4 210 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 URM1Q9BTM9 101 aaKnown RBP10.08□□□□□ -0.8
FN1-226ENST00000496542 LPAR5Q9H1C0 372 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 FBXL15Q9H469 300 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 PIPOXQ9P0Z9 390 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 NKX1-2Q9UD57 310 aaPredicted RBP10.08□□□□□ -0.8
FN1-226ENST00000496542 A3GALT2U3KPV4 340 aa10.08□□□□□ -0.8
FN1-226ENST00000496542 H7C2Y5 167 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 I3L521 148 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 SLC17A2O00624 439 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 HSPA12AO43301 675 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 NDUFA3O95167 84 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 IGLV1-40P01703 118 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 OR8U8P0C7N1 319 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 CT45A6P0DMU7 189 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 CT45A5P0DMU8 189 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 CT45A7P0DMV0 189 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 ARSBP15848 533 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 ZNF616Q08AN1 781 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 KIAA0141Q14154 515 aaPredicted RBP10.07□□□□□ -0.8
FN1-226ENST00000496542 RAB11BQ15907 218 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 ASPHD1Q5U4P2 390 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 GFI1Q99684 422 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
FN1-226ENST00000496542 OR1A1Q9P1Q5 309 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 SCOCQ9UIL1 159 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 AK6Q9Y3D8 172 aaKnown RBP10.07□□□□□ -0.8
FN1-226ENST00000496542 FBXO7Q9Y3I1 522 aa10.07□□□□□ -0.8
FN1-226ENST00000496542 TRBV6-6A0A0A6YYG2 114 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 A0A1W2PN81 502 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 OR5H14A6NHG9 310 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 H0YJW9 148 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 RRHO14718 337 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 RGS10O43665 173 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 LY86O95711 162 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
FN1-226ENST00000496542 CD37P11049 281 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 CHRNA7P36544 502 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 RAB9AP51151 201 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 RUNX1Q01196 453 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 TMEM91Q6ZNR0 172 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 CASTOR1Q8WTX7 329 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 WWC2-AS2Q96NR7 200 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 C11orf54Q9H0W9 315 aaPredicted RBP10.06□□□□□ -0.8
FN1-226ENST00000496542 ALX4Q9H161 411 aaPredicted RBP10.06□□□□□ -0.8
FN1-226ENST00000496542 C12orf4Q9NQ89 552 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
FN1-226ENST00000496542 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
FN1-226ENST00000496542 ARL6IP5O75915 188 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 ZBTB25P24278 435 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 CALRP27797 417 aaKnown RBP10.05□□□□□ -0.8
FN1-226ENST00000496542 CEACAM6P40199 344 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 VEGFCP49767 419 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 CLDN12P56749 244 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 CX3CL1P78423 397 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 TPBGQ13641 420 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 ZNF660Q6AZW8 331 aaPredicted RBP10.05□□□□□ -0.8
FN1-226ENST00000496542 DRAXINQ8NBI3 349 aaPredicted RBP10.05□□□□□ -0.8
FN1-226ENST00000496542 NRG4Q8WWG1 115 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
FN1-226ENST00000496542 ARHGAP5-AS1Q96IT6 56 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms