RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ABCD4O14678 606 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 WNT9BO14905 357 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 TNFSF12O43508 249 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 C1QL1O75973 258 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 DFFBO76075 338 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 WISP2O76076 250 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 ZNF205O95201 554 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 LY86O95711 162 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 HBZP02008 142 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 MBPP02686 304 aaPredicted RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 IGKV1-13P0DP09 117 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 MUC1P15941 1255 aaPredicted RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 KIR2DS2P43631 304 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CEBPDP49716 269 aaPredicted RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 RAB5CP51148 216 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CAV2P51636 162 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 EDDM3BP56851 147 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 RAB2AP61019 212 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 HBG1P69891 147 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 HBG2P69892 147 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 AESQ08117 197 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 FAM27E3Q08E93 113 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 EDDM3AQ14507 147 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 DAZAP2Q15038 168 aaPredicted RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 SLC25A24Q6NUK1 477 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 SHISA2Q6UWI4 295 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 IL34Q6ZMJ4 242 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 Q6ZPA2 131 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 RPRMLQ8N4K4 120 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 EIF4E3Q8N5X7 224 aaKnown RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 OR2C3Q8N628 320 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 Q8NA96 180 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CLEC18CQ8NCF0 446 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 MRGPRDQ8TDS7 321 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 TMEM171Q8WVE6 324 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 TCTEX1D2Q8WW35 142 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 C14orf79Q96F83 325 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 RAB40CQ96S21 281 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CLCC1Q96S66 551 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 HSD17B10Q99714 261 aaKnown RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 MRPL37Q9BZE1 423 aaKnown RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 TOLLIPQ9H0E2 274 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 FAM234AQ9H0X4 552 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 OR2D2Q9H210 308 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 ZNF665Q9H7R5 613 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 ASF1BQ9NVP2 202 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 OR1A1Q9P1Q5 309 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 GNG12Q9UBI6 72 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 LPAR3Q9UBY5 353 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 FBXL17Q9UF56 701 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 PPP1R3CQ9UQK1 317 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 STRAPQ9Y3F4 350 aaKnown RBP5.81□□□□□ -1.48
USP39-219ENST00000496047 CADP27708 2225 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 USF3Q68DE3 2245 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 UBR5O95071 2799 aaPredicted RBP5.8□□□□□ -1.48
USP39-219ENST00000496047 ARID1AO14497 2285 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 TRAV38-1A0A0B4J264 116 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 ODAMA1E959 279 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 NKX2-6A6NCS4 301 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 ZNF705EA8MWA4 302 aaPredicted RBP5.8□□□□□ -1.48
USP39-219ENST00000496047 C12orf77C9JDV5 145 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 FAM90A26D6RGX4 464 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 LGALS8O00214 317 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 TOR1AO14656 332 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 SSSCA1O60232 199 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 PSPNO60542 156 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 PITX3O75364 302 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 HEXAP06865 529 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 CD55P08174 381 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 OR8U9P0C7N5 309 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 FAM87AP0C7U9 286 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 PSG2P11465 335 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 GPR12P47775 334 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 P2RX3P56373 397 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 ERVK-16P61578 105 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 Q6ZS46 218 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 C11orf53Q8IXP5 236 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 STPG2Q8N412 459 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 UBAC2Q8NBM4 344 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 RELL2Q8NC24 303 aaPredicted RBP5.8□□□□□ -1.48
USP39-219ENST00000496047 ST6GALNAC3Q8NDV1 305 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 OR52M1Q8NGK5 317 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 OR1S2Q8NGQ3 325 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 OR8U1Q8NH10 309 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 LHFPL5Q8TAF8 219 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 Q8TCH9 128 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 CYYR1Q96J86 154 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 CXorf58Q96LI9 332 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 SAP30LQ9HAJ7 183 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 LYRM2Q9NU23 88 aaPredicted RBP5.8□□□□□ -1.48
USP39-219ENST00000496047 JKAMPQ9P055 326 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 PRELID3BQ9Y3B1 194 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 PLCE1Q9P212 2302 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 ITPR3Q14573 2671 aa5.8□□□□□ -1.48
USP39-219ENST00000496047 POLEQ07864 2286 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 ARFGEF3Q5TH69 2177 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 PCNX1Q96RV3 2341 aa5.79□□□□□ -1.48
USP39-219ENST00000496047 MFSD2BA6NFX1 497 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms