RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OR5H14A6NHG9 310 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 FCN1O00602 326 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 RAB29O14966 203 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 TFAP2AP05549 437 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 LIMS3P0CW19 117 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 LIMS4P0CW20 117 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 EGR2P11161 476 aaPredicted RBP10.91□□□□□ -0.66
VARS-228ENST00000495010 MGMTP16455 207 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 IGFBP3P17936 291 aaPredicted RBP10.91□□□□□ -0.66
VARS-228ENST00000495010 LY6G6FQ5SQ64 297 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 XAF1Q6GPH4 301 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 RHOXF1Q8NHV9 184 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 IL1F10Q8WWZ1 152 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 LYSTQ99698 3801 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 METTL1Q9UBP6 276 aaKnown RBP10.91□□□□□ -0.66
VARS-228ENST00000495010 DNAH1Q9P2D7 4330 aa10.91□□□□□ -0.66
VARS-228ENST00000495010 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 ANKRD34BA5PLL1 514 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 ST8SIA5O15466 376 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 GPX5O75715 221 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 RBBP9O75884 186 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 TATDN3Q17R31 274 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 Q499Y3 187 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 C6orf141Q5SZD1 244 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 LCN12Q6JVE5 192 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 ZNF562Q6V9R5 426 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 C5orf24Q7Z6I8 188 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 OR13C5Q8NGS8 318 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 MRPL30Q8TCC3 161 aaKnown RBP10.9□□□□□ -0.66
VARS-228ENST00000495010 SMIM19Q96E16 107 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 MRPS18AQ9NVS2 196 aaKnown RBP10.9□□□□□ -0.66
VARS-228ENST00000495010 GAB2Q9UQC2 676 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 WASHC3Q9Y3C0 194 aa10.9□□□□□ -0.66
VARS-228ENST00000495010 SLC22A1O15245 554 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 PDCD6O75340 191 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 BAG2O95816 211 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 CA2P00918 260 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 MOGAT2Q3SYC2 334 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 RPL39P5Q59GN2 51 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 OR2G6Q5TZ20 316 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 GLDNQ6ZMI3 551 aaPredicted RBP10.89□□□□□ -0.67
VARS-228ENST00000495010 PYDC1Q8WXC3 89 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 GHSRQ92847 366 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 NEDD4LQ96PU5 975 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 RNF5Q99942 180 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 IFI27L2Q9H2X8 130 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 BABAM2Q9NXR7 383 aa10.89□□□□□ -0.67
VARS-228ENST00000495010 TRAV8-7A0A075B6U6 113 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 TRBV5-5A0A0J9YX44 114 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 H0YJW9 148 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 H3BUA1 57 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 OGG1O15527 345 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 SLC25A17O43808 307 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 MYL12AP19105 171 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 DCKP27707 260 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 CAPGP40121 348 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 ETV1P50549 477 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
VARS-228ENST00000495010 PSG5Q15238 335 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 YIF1BQ5BJH7 314 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 DMKNQ6E0U4 476 aaPredicted RBP10.88□□□□□ -0.67
VARS-228ENST00000495010 CDH26Q8IXH8 852 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 Q8N402 240 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 CBR4Q8N4T8 237 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 POC5Q8NA72 575 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 GRPEL2Q8TAA5 225 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 SETD6Q8TBK2 473 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 Q96M66 194 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 TSNAXQ99598 290 aaKnown RBP10.88□□□□□ -0.67
VARS-228ENST00000495010 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
VARS-228ENST00000495010 RETNQ9HD89 108 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
VARS-228ENST00000495010 SLC23A1Q9UHI7 598 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 CEPT1Q9Y6K0 416 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 CSMD3Q7Z407 3707 aa10.88□□□□□ -0.67
VARS-228ENST00000495010 A0A1W2PPK0 400 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 SHISA3A0PJX4 238 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 ATP5HO75947 161 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 CNIH1O95406 144 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 CPEP16870 476 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 FSTP19883 344 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 RPS16P62249 146 aaKnown RBP10.87□□□□□ -0.67
VARS-228ENST00000495010 FXYD3Q14802 87 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 HMGN3Q15651 99 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 OR5T1Q8NG75 326 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 FAM46BQ96A09 425 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 FAM110AQ9BQ89 295 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
VARS-228ENST00000495010 LOC100130705A0A1B0GUX0 176 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 IRGMA1A4Y4 181 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 MED21Q13503 144 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 ABHD14BQ96IU4 210 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms