RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FAM90A7PA6NKC0 464 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 FAM90A23PA8MXZ1 464 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 FCN1O00602 326 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 YPEL1O60688 119 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 CA11O75493 328 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 CELP19835 753 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 INSL4Q14641 139 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 C6orf201Q7Z4U5 140 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 LYPD6Q86Y78 171 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 MINDY2Q8NBR6 621 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 NPBQ8NG41 125 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 GGHQ92820 318 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 MS4A10Q96PG2 267 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 YPEL2Q96QA6 119 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 FAAP24Q9BTP7 215 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 TOLLIPQ9H0E2 274 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 GAB2Q9UQC2 676 aa9.76□□□□□ -0.85
SKA1-205ENST00000494518 FOXA2Q9Y261 457 aaPredicted RBP9.76□□□□□ -0.85
SKA1-205ENST00000494518 LOC100996750A0A140TA64 210 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 RRHO14718 337 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 RGS11O94810 467 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 NDUFA3O95167 84 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
SKA1-205ENST00000494518 CX3CL1P78423 397 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 HTD2P86397 168 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 ST3GAL4Q11206 333 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 MED21Q13503 144 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 HMGN3Q15651 99 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 C19orf54Q5BKX5 351 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 GALMQ96C23 342 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 ABHD14BQ96IU4 210 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 NEDD4LQ96PU5 975 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 NICN1Q9BSH3 213 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 KRTAP4-6Q9BYQ5 205 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 CST11Q9H112 138 aa9.75□□□□□ -0.85
SKA1-205ENST00000494518 CHMP1AQ9HD42 196 aaPredicted RBP9.75□□□□□ -0.85
SKA1-205ENST00000494518 H7C2Y5 167 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 MYL12BO14950 172 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 GLAP06280 429 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
SKA1-205ENST00000494518 CT45A6P0DMU7 189 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 CT45A5P0DMU8 189 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 CT45A7P0DMV0 189 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
SKA1-205ENST00000494518 LYL1P12980 280 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 TPPP2P59282 170 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 PITPNAQ00169 270 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 AHSA2Q719I0 299 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 C10orf67Q8IYJ2 551 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 NKAIN3Q8N8D7 197 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 ZMAT4Q9H898 229 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 PALMDQ9NP74 551 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 STEAP1Q9UHE8 339 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 ERGIC3Q9Y282 383 aa9.74□□□□□ -0.85
SKA1-205ENST00000494518 BIRC6Q9NR09 4857 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 H0YJW9 148 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 HTR2CP28335 458 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 LINC00205P59089 165 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 TAS2R43P59537 309 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 ACTBL2Q562R1 376 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 ZNF660Q6AZW8 331 aaPredicted RBP9.73□□□□□ -0.85
SKA1-205ENST00000494518 ACSM6Q6P461 480 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 UNQ5815/PRO19632Q6UWF5 114 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 ZNF554Q86TJ5 538 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 PPP1R27Q86WC6 154 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 CDH26Q8IXH8 852 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 SVOPQ8N4V2 548 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 DRAXINQ8NBI3 349 aaPredicted RBP9.73□□□□□ -0.85
SKA1-205ENST00000494518 LFNGQ8NES3 379 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 OR4C12Q96R67 309 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 UQCC2Q9BRT2 126 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 HDHD3Q9BSH5 251 aaPredicted RBP9.73□□□□□ -0.85
SKA1-205ENST00000494518 GHITMQ9H3K2 345 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 OR1A1Q9P1Q5 309 aa9.73□□□□□ -0.85
SKA1-205ENST00000494518 HYDINQ4G0P3 5121 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 EFCAB10A6NFE3 127 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 RAB29O14966 203 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 CA2P00918 260 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 GNAO1P09471 354 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 OR8U9P0C7N5 309 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 WNT4P56705 351 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 RPS27AP62979 156 aaKnown RBP9.72□□□□□ -0.85
SKA1-205ENST00000494518 DEFA5Q01523 94 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 RBM48Q5RL73 367 aaKnown RBP9.72□□□□□ -0.85
SKA1-205ENST00000494518 TTC23Q5W5X9 447 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 LAIR2Q6ISS4 152 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 SETD9Q8NE22 299 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 TMED9Q9BVK6 235 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
SKA1-205ENST00000494518 PIPOXQ9P0Z9 390 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms