RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CTSZQ9UBR2 303 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 RPUSD1Q9UJJ7 312 aaKnown RBP5.6□□□□□ -1.51
MSH5-217ENST00000494458 PKDREJQ9NTG1 2253 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 DSCAML1Q8TD84 2053 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 SPTBN1Q01082 2364 aaKnown RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 HRNRQ86YZ3 2850 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 TRGV10A0A0A0MS01 117 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 TRBV23-1A0A0A0MS06 115 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 A0A0D9SG52 128 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 NKX6-3A6NJ46 265 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 C17orf98A8MV24 154 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 F5H0A9 414 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 PHF1O43189 567 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 RBFOX2O43251 390 aaKnown RBP eCLIP5.59□□□□□ -1.51
MSH5-217ENST00000494458 HSPA12AO43301 675 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 OR2F2O95006 317 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 F12P00748 615 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 RBP4P02753 201 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 OR8U9P0C7N5 309 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 PPP1CCP36873 323 aaKnown RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 ZNF137PP52743 207 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 TLE4Q04727 773 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 OR2F1Q13607 317 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 CT45A1Q5HYN5 189 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 TMEM200BQ69YZ2 307 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 FAM53AQ6NSI3 398 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 SLC25A48Q6ZT89 311 aaKnown RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 KCNRGQ8N5I3 272 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 LINC00311Q8N616 119 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 SLC35G3Q8N808 338 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 BOLLQ8N9W6 283 aaKnown RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 DEFB108BQ8NET1 73 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 OR8U1Q8NH10 309 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 CT45A3Q8NHU0 189 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 RFESDQ8TAC1 157 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 DDB2Q92466 427 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 RBPMSQ93062 196 aaKnown RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 AQP10Q96PS8 301 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 IFI27L2Q9H2X8 130 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 ZFP57Q9NU63 452 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 SDHAF2Q9NX18 166 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 COA4Q9NYJ1 87 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 IDI2-AS1Q9NZ38 188 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 PRR13Q9NZ81 148 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 SLC25A10Q9UBX3 287 aaPredicted RBP5.59□□□□□ -1.51
MSH5-217ENST00000494458 HSPB11Q9Y547 144 aa5.59□□□□□ -1.51
MSH5-217ENST00000494458 EPG5Q9HCE0 2579 aa5.59□□□□□ -1.52
MSH5-217ENST00000494458 UBR5O95071 2799 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 A0A1B0GU03 582 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 RNF212BA8MTL3 300 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 DVL1O14640 695 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 HSD17B6O14756 317 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 NDUFB3O43676 98 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 DEDDO75618 318 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 MMP23AO75900 390 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 IFNA21P01568 189 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 IL6RP08887 468 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 HOXB5P09067 269 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 RNF224P0DH78 156 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 PAX1P15863 534 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 S100GP29377 79 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 S100A11P31949 105 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 DUTP33316 252 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 RAB7AP51149 207 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 ARHGDIBP52566 201 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 EDDM3BP56851 147 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 RPL30P62888 115 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 RPL31P62899 125 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 EDDM3AQ14507 147 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 OPCMLQ14982 345 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 IAH1Q2TAA2 248 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 LRRC10Q5BKY1 277 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 KIAA2026Q5HYC2 2103 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 UTF1Q5T230 341 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 TEX261Q6UWH6 196 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 C1orf229Q6ZS94 237 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 ACOT7LQ6ZUV0 252 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 TMUB2Q71RG4 321 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 ZNF767PQ75MW2 155 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 FGFRL1Q8N441 504 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 DMBX1Q8NFW5 382 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 GRPEL2Q8TAA5 225 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 NINJ1Q92982 152 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 RRNAD1Q96FB5 475 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 HSD17B10Q99714 261 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 METTL8Q9H825 291 aaKnown RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 CHODLQ9H9P2 273 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 C19orf12Q9NSK7 152 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 U3KQ87 197 aa5.58□□□□□ -1.52
MSH5-217ENST00000494458 KMT2BQ9UMN6 2715 aaPredicted RBP5.58□□□□□ -1.52
MSH5-217ENST00000494458 A0A0G2JRQ6 117 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 FAM90A9PA6NNJ1 464 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 LINC00473A8K010 186 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ADAM20O43506 726 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 IGKV1-5P01602 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms