RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 A0A1W2PPZ6 126 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 PINLYPA6NC86 204 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 PPP1R2P9O14990 202 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 GATCO43716 136 aaKnown RBP9.73□□□□□ -0.85
RFC4-214ENST00000494047 SYNGR1O43759 233 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 MPDU1O75352 247 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 NXPH2O95156 264 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 VENTXO95231 258 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 MAGEA5P43359 124 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 PSMB3P49720 205 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 MEOX1P50221 254 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 SOX8P57073 446 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 SRYQ05066 204 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 ELOBQ15370 118 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 HAGHQ16775 308 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 TMEM14EPQ6UXP3 125 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 FAM90A1Q86YD7 464 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 C17orf78Q8N4C9 275 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 MDS2Q8NDY4 140 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 PPP1R35Q8TAP8 253 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 EDARADDQ8WWZ3 215 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 HSD17B10Q99714 261 aaKnown RBP9.73□□□□□ -0.85
RFC4-214ENST00000494047 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.73□□□□□ -0.85
RFC4-214ENST00000494047 KCNS2Q9ULS6 477 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 MGAQ8IWI9 3026 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 hCG_1809904A0A1W2PP81 198 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 A0A1W2PR64 198 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 A0A1W2PRV1 198 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
RFC4-214ENST00000494047 SLC33A1O00400 549 aaPredicted RBP9.72□□□□□ -0.85
RFC4-214ENST00000494047 RAB29O14966 203 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 OR2H2O95918 312 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 ADH4P08319 380 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 GLI4P10075 376 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 COX5AP20674 150 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 PPP1CBP62140 327 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 TNFRSF9Q07011 255 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 SLC38A11Q08AI6 406 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 TESK1Q15569 626 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 CLEC9AQ6UXN8 241 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 CYP2G1PQ6ZSU1 146 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 RDH5Q92781 318 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 TAF15Q92804 592 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFC4-214ENST00000494047 ISOC2Q96AB3 205 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 C20orf24Q9BUV8 137 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 GGACTQ9BVM4 153 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 HES4Q9HCC6 221 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 NBEAQ8NFP9 2946 aa9.72□□□□□ -0.85
RFC4-214ENST00000494047 ARHGAP21Q5T5U3 1957 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 TRGV5A0A0B4J1U4 118 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 MAP1LC3B2A6NCE7 125 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 HS3ST1O14792 307 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 SMPD2O60906 423 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 CLDN14O95500 239 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 TMEM50AO95807 157 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 ARG1P05089 322 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 FBP1P09467 338 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 EPHA1P21709 976 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 WNT5AP41221 380 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 KIR2DS2P43631 304 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
RFC4-214ENST00000494047 SMIM21Q3B7S5 101 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 TMEM30BQ3MIR4 351 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 P4HA3Q7Z4N8 544 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 IL1F10Q8WWZ1 152 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 RAB1CQ92928 201 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 LURAP1Q96LR2 239 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 RARRES2Q99969 163 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 BCL2L14Q9BZR8 327 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 ACTR3CQ9C0K3 210 aaPredicted RBP9.71□□□□□ -0.86
RFC4-214ENST00000494047 MAP1LC3BQ9GZQ8 125 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 FGF23Q9GZV9 251 aaPredicted RBP9.71□□□□□ -0.86
RFC4-214ENST00000494047 SLC39A9Q9NUM3 307 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 RALYQ9UKM9 306 aaKnown RBP9.71□□□□□ -0.86
RFC4-214ENST00000494047 MED12Q93074 2177 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 SPTA1P02549 2419 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 ATRXP46100 2492 aa9.71□□□□□ -0.86
RFC4-214ENST00000494047 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
RFC4-214ENST00000494047 ZNF205O95201 554 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 PTBP3O95758 552 aaKnown RBP9.7□□□□□ -0.86
RFC4-214ENST00000494047 IL18BPO95998 194 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 HAND1O96004 215 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 CD99P14209 185 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 CA6P23280 308 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 IL2RGP31785 369 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 OR2B8PP59922 312 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 RAB11AP62491 216 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 PDCD1Q15116 288 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 MDP1Q86V88 176 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 ODF3L1Q8IXM7 274 aa9.7□□□□□ -0.86
RFC4-214ENST00000494047 FAM169BQ8N8A8 192 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms