RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ADAD2Q8NCV1 583 aaKnown RBP9.31□□□□□ -0.92
MCF2L-231ENST00000494043 BVESQ8NE79 360 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 OR13D1Q8NGV5 346 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 OR9G1Q8NH87 305 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF596Q8TC21 504 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 TNFRSF14Q92956 283 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 TMEM230Q96A57 120 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 C5orf30Q96GV9 206 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 SLC2A9Q9NRM0 540 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 RNF150Q9ULK6 438 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 CSMD1Q96PZ7 3565 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 NOTCH2Q04721 2471 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 A0A0B4J293 547 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 J3QR06 171 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PRAF2O60831 178 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 TOX4O94842 621 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 DHFRP00374 187 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 IGLV2-14P01704 120 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 VSIG10L2P0DP72 767 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 GATA3P23771 443 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 GPR12P47775 334 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 GZMKP49863 264 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PIGPP57054 158 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 UBE2MP61081 183 aaKnown RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 RND3P61587 244 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PHLDA2Q53GA4 152 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 NCR3LG1Q68D85 454 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 HCP5Q6MZN7 132 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 CMTM1Q8IZ96 169 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PNKDQ8N490 385 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 DRAM1Q8N682 238 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 CCDC71LQ8N9Z2 235 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 BEND2Q8NDZ0 799 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 OR11H6Q8NGC7 330 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 TMEM186Q96B77 213 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 MSI2Q96DH6 328 aaKnown RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 AKR1E2Q96JD6 320 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 TBX15Q96SF7 602 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 PCGF1Q9BSM1 259 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 BEX2Q9BXY8 128 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ALX4Q9H161 411 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 HEXA-AS1Q9H8Q6 139 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 BEX1Q9HBH7 125 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 HIF1ANQ9NWT6 349 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ZNRD1Q9P1U0 126 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF221Q9UK13 617 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 ZANQ9Y493 2812 aa9.3□□□□□ -0.92
MCF2L-231ENST00000494043 YLPM1P49750 1951 aaKnown RBP9.3□□□□□ -0.92
MCF2L-231ENST00000494043 SAA2-SAA4A0A096LPE2 208 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 TOR1AO14656 332 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 IGLV1-47P01700 117 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 IL5P05113 134 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-231ENST00000494043 AKR1C4P17516 323 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 PRRX1P54821 245 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 DHODHQ02127 395 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 KLRD1Q13241 179 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 TATDN3Q17R31 274 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 FAHD2BQ6P2I3 314 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-231ENST00000494043 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 LYG1Q8N1E2 194 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-231ENST00000494043 ZBTB34Q8NCN2 500 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 CAPSLQ8WWF8 208 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 FAHD2AQ96GK7 314 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 SDHAF2Q9NX18 166 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 PIPOXQ9P0Z9 390 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 ITGB1BP2Q9UKP3 347 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 GAB2Q9UQC2 676 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 OTOGQ6ZRI0 2925 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 CR1P17927 2039 aa9.29□□□□□ -0.92
MCF2L-231ENST00000494043 CRYM-AS1A6NIL9 109 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ODF3BA8MYP8 253 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 RNASEK-C17orf49H0YIS7 233 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 J3QLI3 93 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 RAB29O14966 203 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 TNFSF12O43508 249 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 PGLYRP1O75594 196 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 OR4E1P0C645 316 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 IL3RAP26951 378 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 S100GP29377 79 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF137PP52743 207 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 HLA-DRB5Q30154 266 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 C4orf46Q504U0 113 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 RPL39P5Q59GN2 51 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 TMEM128Q5BJH2 165 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF626Q68DY1 528 aa9.28□□□□□ -0.92
MCF2L-231ENST00000494043 GLDNQ6ZMI3 551 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 CIARTQ8N365 385 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-231ENST00000494043 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms