RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 HSD17B6O14756 317 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 IL7P13232 177 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 RAB7AP51149 207 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.37
HPS4-216ENST00000493455 DEFB112Q30KQ8 113 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 LDLRAD2Q5SZI1 272 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 DYNAPQ8N1N2 210 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 OR56B4Q8NH76 319 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 TSC22D3Q99576 134 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 IFI27L2Q9H2X8 130 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 TNFRSF19Q9NS68 423 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 DPM3Q9P2X0 92 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 ZNF221Q9UK13 617 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 OR2W1Q9Y3N9 320 aa12.77□□□□□ -0.37
HPS4-216ENST00000493455 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 IGKV1D-13A0A0B4J2D9 117 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 PPYP01298 95 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
HPS4-216ENST00000493455 IGKV1-13P0DP09 117 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 CD40LGP29965 261 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 CEACAM3P40198 252 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 PPP5CP53041 499 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 AP3S2P59780 193 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 LSAMPQ13449 338 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 Q3ZCU0 254 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 LINC00311Q8N616 119 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 OR6F1Q8NGZ6 308 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 SLC5A7Q9GZV3 580 aa12.76□□□□□ -0.37
HPS4-216ENST00000493455 CRLF1O75462 422 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 CD74P04233 296 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 FBP1P09467 338 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 TBPP20226 339 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
HPS4-216ENST00000493455 BPIFB3P59826 476 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 KLF9Q13886 244 aaPredicted RBP12.75□□□□□ -0.37
HPS4-216ENST00000493455 MEF2DQ14814 521 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 VAX1Q5SQQ9 334 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 MINOS1Q5TGZ0 78 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 LDLRAD3Q86YD5 345 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 SIGLECL1Q8N7X8 197 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 CCDC32Q9BV29 185 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 ZNF107Q9UII5 783 aaPredicted RBP12.75□□□□□ -0.37
HPS4-216ENST00000493455 MINOS1-NBL1R4GNA1 71 aa12.75□□□□□ -0.37
HPS4-216ENST00000493455 M0R1X1 148 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 RAB29O14966 203 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 TUSC2O75896 110 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 PGAM2P15259 253 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 LY6G6FQ5SQ64 297 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 TGIF2LXQ8IUE1 241 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 ODF3L1Q8IXM7 274 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 GIMAP1Q8WWP7 306 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
HPS4-216ENST00000493455 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
HPS4-216ENST00000493455 S1PR3Q99500 378 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 TOLLIPQ9H0E2 274 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 HRASLSQ9HDD0 168 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 PIPOXQ9P0Z9 390 aa12.74□□□□□ -0.37
HPS4-216ENST00000493455 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 OR5H14A6NHG9 310 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 ITGB1BP1O14713 200 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 TNFSF12O43508 249 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 RAB13P51153 203 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 BAMBIQ13145 260 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 GLDNQ6ZMI3 551 aaPredicted RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 ARRDC1Q8N5I2 433 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 DRAXINQ8NBI3 349 aaPredicted RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 RTN4IP1Q8WWV3 396 aaPredicted RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 MOB3AQ96BX8 217 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 DUX5Q96PT3 197 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 AGMATQ9BSE5 352 aa12.73□□□□□ -0.37
HPS4-216ENST00000493455 MRPL20Q9BYC9 149 aaKnown RBP12.73□□□□□ -0.37
HPS4-216ENST00000493455 TEP1Q99973 2627 aaKnown RBP12.72□□□□□ -0.37
HPS4-216ENST00000493455 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 CD24P25063 80 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 ARHGDIBP52566 201 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 LY6EQ16553 131 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 ZNF660Q6AZW8 331 aaPredicted RBP12.72□□□□□ -0.37
HPS4-216ENST00000493455 DHRS11Q6UWP2 260 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 DRAM1Q8N682 238 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 ZNF645Q8N7E2 425 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 GPHA2Q96T91 129 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 SSX3Q99909 188 aa12.72□□□□□ -0.37
HPS4-216ENST00000493455 SDHAF2Q9NX18 166 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms