RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 EDARADDQ8WWZ3 215 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 CREB3L1Q96BA8 519 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 ABHD14BQ96IU4 210 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 ZNF2Q9BSG1 426 aaPredicted RBP13.96□□□□□ -0.17
LIME1-208ENST00000493265 MCUBQ9NWR8 336 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 DIRAS3O95661 229 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 FSHBP01225 129 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 IGLV1-47P01700 117 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 TBPP20226 339 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 HTR1DP28221 377 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 CD40LGP29965 261 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 AP3S2P59780 193 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 HERV-K104P61576 105 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 KLF9Q13886 244 aaPredicted RBP13.95□□□□□ -0.18
LIME1-208ENST00000493265 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
LIME1-208ENST00000493265 BEND2Q8NDZ0 799 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 OR6F1Q8NGZ6 308 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 SLC6A7Q99884 636 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 CCDC32Q9BV29 185 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 ZNF107Q9UII5 783 aaPredicted RBP13.95□□□□□ -0.18
LIME1-208ENST00000493265 AMMECR1Q9Y4X0 333 aaPredicted RBP13.95□□□□□ -0.18
LIME1-208ENST00000493265 HILPDAQ9Y5L2 63 aa13.95□□□□□ -0.18
LIME1-208ENST00000493265 A0A0U1RQK1 487 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 PPYP01298 95 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 CD74P04233 296 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 REG1BP48304 166 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 LUMP51884 338 aaPredicted RBP13.94□□□□□ -0.18
LIME1-208ENST00000493265 MEF2DQ14814 521 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 MIDNQ504T8 468 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 VAX1Q5SQQ9 334 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 LDLRAD2Q5SZI1 272 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 SECTM1Q8WVN6 248 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 TOMM40LQ969M1 308 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 FAM96BQ9Y3D0 163 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
LIME1-208ENST00000493265 ANK2Q01484 3957 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 IGKV1D-13A0A0B4J2D9 117 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 MDFIC2A0A1B0GVS7 189 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 DISC1C4P0D8 188 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 IGKV1-13P0DP09 117 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 IL3RAP26951 378 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 GPR12P47775 334 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 RAB7AP51149 207 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 DIAPH2-AS1Q14236 149 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 SSX2Q16385 188 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 Q3ZCU0 254 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 C8orf31Q8N9H6 132 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 GIMAP1Q8WWP7 306 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 IFI27L2Q9H2X8 130 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 HRASLSQ9HDD0 168 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
LIME1-208ENST00000493265 LEUTXA8MZ59 168 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 HSD17B6O14756 317 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 TUSC2O75896 110 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 SRD5A1P18405 259 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 FAUP35544 74 aaKnown RBP13.92□□□□□ -0.18
LIME1-208ENST00000493265 CEACAM3P40198 252 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 SRSF2Q01130 221 aaKnown RBP13.92□□□□□ -0.18
LIME1-208ENST00000493265 RPL39P5Q59GN2 51 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 LY6G6FQ5SQ64 297 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 TPTE2P1Q5T6R2 138 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 LDLRAD3Q86YD5 345 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 OR51S1Q8NGJ8 323 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 RPEQ96AT9 228 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 SLC5A7Q9GZV3 580 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
LIME1-208ENST00000493265 TBL2Q9Y4P3 447 aaKnown RBP13.92□□□□□ -0.18
LIME1-208ENST00000493265 SAA2-SAA4A0A096LPE2 208 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 UPK1BO75841 260 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 ZNF735P0CB33 412 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 SAA2P0DJI9 122 aaPredicted RBP13.91□□□□□ -0.18
LIME1-208ENST00000493265 DEFB112Q30KQ8 113 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 ZNF660Q6AZW8 331 aaPredicted RBP13.91□□□□□ -0.18
LIME1-208ENST00000493265 ODF3L1Q8IXM7 274 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 ARRDC1Q8N5I2 433 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 AGMATQ9BSE5 352 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 FXYD6Q9H0Q3 95 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
LIME1-208ENST00000493265 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 HAX1O00165 279 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 RAB29O14966 203 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 PGAM2P15259 253 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 BPIFB3P59826 476 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 C16orf87Q6PH81 154 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 MOB3AQ96BX8 217 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 S1PR3Q99500 378 aa13.9□□□□□ -0.18
LIME1-208ENST00000493265 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms