RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 AP3S1Q92572 193 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 GINS4Q9BRT9 223 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 CABLES2Q9BTV7 478 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 ST6GALNAC5Q9BVH7 336 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 PRSS22Q9GZN4 317 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 PARP12Q9H0J9 701 aaKnown RBP10.23□□□□□ -0.77
CLIP2-209ENST00000493166 IFI27L2Q9H2X8 130 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 RDH8Q9NYR8 311 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 PIPOXQ9P0Z9 390 aa10.23□□□□□ -0.77
CLIP2-209ENST00000493166 RAB29O14966 203 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 SSX5O60225 188 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 DIRAS3O95661 229 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 CD1BP29016 333 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 OR3A3P47888 321 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 TMBIM6P55061 237 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 HNF4GQ14541 408 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 FAM71F2Q6NXP2 309 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 ZNF833PQ6ZTB9 187 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 WFDC12Q8WWY7 111 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 S1PR3Q99500 378 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 BCL7BQ9BQE9 202 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 C11orf54Q9H0W9 315 aaPredicted RBP10.22□□□□□ -0.77
CLIP2-209ENST00000493166 AUNIPQ9H7T9 357 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 MOB4Q9Y3A3 225 aa10.22□□□□□ -0.77
CLIP2-209ENST00000493166 IGKV1D-8A0A087WSZ0 117 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 TRBV6-7A0A0A0MS04 114 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 M0QZK8 103 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 APOA1P02647 267 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 EIF4EP06730 217 aaKnown RBP10.21□□□□□ -0.77
CLIP2-209ENST00000493166 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.77
CLIP2-209ENST00000493166 SOX6P35712 828 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 PROK1P58294 105 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 TAS2R20P59543 309 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 BLCAPP62952 87 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 LSAMPQ13449 338 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 SPCS2Q15005 226 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 OR2T10Q8NGZ9 312 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 ABHD14BQ96IU4 210 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 EAF1Q96JC9 268 aaPredicted RBP10.21□□□□□ -0.77
CLIP2-209ENST00000493166 CMTM3Q96MX0 182 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 MRPL20Q9BYC9 149 aaKnown RBP10.21□□□□□ -0.77
CLIP2-209ENST00000493166 GHITMQ9H3K2 345 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
CLIP2-209ENST00000493166 TET2Q6N021 2002 aaPredicted RBP10.21□□□□□ -0.78
CLIP2-209ENST00000493166 SMIM31A0A1B0GVY4 71 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 ZNF736B4DX44 427 aaPredicted RBP10.2□□□□□ -0.78
CLIP2-209ENST00000493166 HPGDSO60760 199 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 MOSP00540 346 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 CTXN2P0C2S0 81 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 PTHLHP12272 177 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 GPR12P47775 334 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 ABCA11PQ4W5N1 156 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 RPL39P5Q59GN2 51 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 C11orf88Q6PI97 169 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 Q8N2B8 174 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 TOLLIPQ9H0E2 274 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 ANXA10Q9UJ72 324 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 RNF150Q9ULK6 438 aa10.2□□□□□ -0.78
CLIP2-209ENST00000493166 RBM7Q9Y580 266 aaKnown RBP10.2□□□□□ -0.78
CLIP2-209ENST00000493166 MEIS3P1A6NDR6 274 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 FAM25AB3EWG3 89 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 FAM25CB3EWG5 89 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 FAM25GB3EWG6 89 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 PEX14O75381 377 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 OR8U9P0C7N5 309 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 ELK1P19419 428 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 VDAC2P45880 294 aaPredicted RBP10.19□□□□□ -0.78
CLIP2-209ENST00000493166 CBX5P45973 191 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 ARPC4P59998 168 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 EBI3Q14213 229 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 CNIH2Q6PI25 160 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 Q6ZS46 218 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 Q8N6K4 173 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 GVQW1Q8N7I0 195 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 C5orf56Q8N8D9 126 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 BEST4Q8NFU0 473 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 OR8U1Q8NH10 309 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 ISOC1Q96CN7 298 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 ZNF251Q9BRH9 671 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 OR2D2Q9H210 308 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
CLIP2-209ENST00000493166 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
CLIP2-209ENST00000493166 NCBP2LA6PVI3 153 aaKnown RBP10.18□□□□□ -0.78
CLIP2-209ENST00000493166 H3BMQ9 156 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 FGF16O43320 207 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 AMY1AP04745 511 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 AMY2AP04746 511 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 VSIG10L2P0DP72 767 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
CLIP2-209ENST00000493166 C9orf152Q5JTZ5 239 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
CLIP2-209ENST00000493166 H1FOOQ8IZA3 346 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms