RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	RDH12	Q96NR8	316 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CENPO	Q9BU64	300 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	DPCD	Q9BVM2	203 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	SLA2	Q9H6Q3	261 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PARP11	Q9NR21	331 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PLSCR3	Q9NRY6	295 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF355P	Q9NSJ1	428 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	BABAM2	Q9NXR7	383 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	IDI2-AS1	Q9NZ38	188 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ABRACL	Q9P1F3	81 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	MDFIC	Q9P1T7	246 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	GNG12	Q9UBI6	72 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ST3GAL6	Q9Y274	331 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	EXOG	Q9Y2C4	368 aa	Known RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	EFCAB10	A6NFE3	127 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	OR4C45	A6NMZ5	311 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	C11orf94	C9JXX5	98 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	SLC33A1	O00400	549 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	SDCBP	O00560	298 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	HSPB6	O14558	160 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	EI24	O14681	340 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ATP6V0E1	O15342	81 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ORC5	O43913	435 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	MOS	P00540	346 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	IGHV3-7	P01780	117 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	GLA	P06280	429 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	EPHA2	P29317	976 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	POLR2I	P36954	125 aa	Known RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	OR3A1	P47881	315 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	APOC4	P55056	127 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	MRPS15	P82914	257 aa	Known RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF85	Q03923	595 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	RIPK1	Q13546	671 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	KLF5	Q13887	457 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	LTC4S	Q16873	150 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ECSCR	Q19T08	205 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	MPV17L	Q2QL34	196 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	STEAP3	Q658P3	488 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	PVRIG	Q6DKI7	326 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602		Q6ZRM9	215 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	SLC16A13	Q7RTY0	426 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	CDH26	Q8IXH8	852 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	JAGN1	Q8N5M9	183 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	MS4A15	Q8N5U1	240 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602		Q8N6K4	173 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	OR51T1	Q8NGJ9	327 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	OR52M1	Q8NGK5	317 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	RFESD	Q8TAC1	157 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	LGALS12	Q96DT0	336 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	PELI1	Q96FA3	418 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	TMEM80	Q96HE8	168 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	CCDC140	Q96MF4	163 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	NEDD4L	Q96PU5	975 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	SPACA5	Q96QH8	159 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	RANGRF	Q9HD47	186 aa	Predicted RBP	3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	ERVK13-1	Q9NX77	482 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	CALY	Q9NYX4	217 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	GHRL	Q9UBU3	117 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602	STEAP1	Q9UHE8	339 aa		3.98	□□□□□ -1.77
SEC13-219	ENST00000492602		A0A087X0M5	115 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IGHV1-3	A0A0C4DH29	117 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IGKV1-9	A0A0C4DH69	117 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602		A0A1B0GX30	115 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	AIP	O00170	330 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SOX15	O60248	233 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IFNA10	P01566	189 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IL1A	P01583	271 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	UBB	P0CG47	229 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SERPINA2	P20848	420 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	FUT3	P21217	361 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CD1B	P29016	333 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CAPG	P40121	348 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	KIR2DS2	P43631	304 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	REG1B	P48304	166 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SOX2	P48431	317 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MECP2	P51608	486 aa	Known RBP	3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	PSMD7	P51665	324 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	F2RL1	P55085	397 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CBX3	Q13185	183 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	DYRK1A	Q13627	763 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	PLGLA	Q15195	96 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	TATDN3	Q17R31	274 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602		Q3ZCU0	254 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SLC22A6	Q4U2R8	563 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	YIF1B	Q5BJH7	314 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	DDI2	Q5TDH0	399 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	PRR18	Q8N4B5	295 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	DHRSX	Q8N5I4	330 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	C8orf31	Q8N9H6	132 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SUMF2	Q8NBJ7	301 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MINDY2	Q8NBR6	621 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MRGPRD	Q8TDS7	321 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CYGB	Q8WWM9	190 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	LEAP2	Q969E1	77 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	GALM	Q96C23	342 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	RHOV	Q96L33	236 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MS4A10	Q96PG2	267 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms