RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 COL10A1Q03692 680 aa10.45□□□□□ -0.74
HMGN1-220ENST00000492280 GUSBP1Q15486 140 aa10.45□□□□□ -0.74
HMGN1-220ENST00000492280 OR2Z1Q8NG97 314 aa10.45□□□□□ -0.74
HMGN1-220ENST00000492280 PRELID3BQ9Y3B1 194 aa10.45□□□□□ -0.74
HMGN1-220ENST00000492280 IGHV2OR16-5A0A0B4J2B6 119 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-220ENST00000492280 S1PR2O95136 353 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 HEXAP06865 529 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 CD55P08174 381 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 S100GP29377 79 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-220ENST00000492280 LCN15Q6UWW0 184 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 STX12Q86Y82 276 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 OR8G5Q8NG78 346 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 CLEC18AA5D8T8 446 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 C17orf98A8MV24 154 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 SYNGR2O43760 224 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 HMGN3Q15651 99 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 CLEC18CQ8NCF0 446 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 LRRC29Q8WV35 223 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 STARD4Q96DR4 205 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 ATP5SQ99766 215 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 PSENENQ9NZ42 101 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 KPTNQ9Y664 436 aa10.44□□□□□ -0.74
HMGN1-220ENST00000492280 TM4SF5O14894 197 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 COX5AP20674 150 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 AKR1C8PQ5T2L2 129 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 ACP7Q6ZNF0 438 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 C22orf34Q6ZV56 151 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 FGFRL1Q8N441 504 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 FAM24BQ8N5W8 94 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 LEAP2Q969E1 77 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
HMGN1-220ENST00000492280 ABCA4P78363 2273 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 TET2Q6N021 2002 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-220ENST00000492280 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 A0A1W2PPE3 182 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 CLDN1O95832 211 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 LMO1P25800 156 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 BRWD1-AS2P59051 145 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 FLI1Q01543 452 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-220ENST00000492280 Q3ZCU0 254 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 CYB561D1Q8N8Q1 229 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 TCTEX1D2Q8WW35 142 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 HIST1H2BAQ96A08 127 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 STRAPQ9Y3F4 350 aaKnown RBP10.43□□□□□ -0.74
HMGN1-220ENST00000492280 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
HMGN1-220ENST00000492280 ASH1LQ9NR48 2969 aaKnown RBP10.43□□□□□ -0.74
HMGN1-220ENST00000492280 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 ZFP92A6NM28 416 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 LINC00473A8K010 186 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 PRSS44E7EML9 344 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 M0R1B8 84 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 MDH2P40926 338 aaKnown RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SULT1A1P50225 295 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 RAB13P51153 203 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 Q8IYB0 196 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 LILRB2Q8N423 598 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 CD177Q8N6Q3 437 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SARAFQ96BY9 339 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF665Q9H7R5 613 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 LIN7CQ9NUP9 197 aaKnown RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 PSG11Q9UQ72 335 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 AQP7O14520 342 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 GCH1P30793 250 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 OR2B8PP59922 312 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 RPL23AP62750 156 aaKnown RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 ZNRF1Q8ND25 227 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 GALMQ96C23 342 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SLC35B3Q9H1N7 401 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 KCNIP1Q9NZI2 227 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 GNG13Q9P2W3 67 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SH3BGRL2Q9UJC5 107 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 PROCRQ9UNN8 238 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 PTPRQQ9UMZ3 2332 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 A0A1B0GU03 582 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 HABP2Q14520 560 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-220ENST00000492280 SOHLH1Q5JUK2 328 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 MOB1BQ7L9L4 216 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 S100PBPQ96BU1 408 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 WIPI2Q9Y4P8 454 aa10.42□□□□□ -0.74
HMGN1-220ENST00000492280 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 COL8A2P25067 703 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 CD82P27701 267 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF726P1Q15940 193 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms