RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DEFB136Q30KP8 78 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 DEFB121Q5J5C9 76 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF660Q6AZW8 331 aaPredicted RBP6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 LIN54Q6MZP7 749 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 C11orf87Q6NUJ2 197 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 CEACAM19Q7Z692 300 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 OR6M1Q8NGM8 313 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 OR5M8Q8NGP6 311 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 NRG4Q8WWG1 115 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 NEDD4LQ96PU5 975 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 TMEM59Q9BXS4 323 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 ANKRD60Q9BZ19 345 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 TOLLIPQ9H0E2 274 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 LPAR5Q9H1C0 372 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 PIPOXQ9P0Z9 390 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 NKX1-2Q9UD57 310 aaPredicted RBP6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 NUBP2Q9Y5Y2 271 aa6.51□□□□□ -1.37
SMARCB1-207ENST00000491967 OR5H14A6NHG9 310 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 PTGES3LE9PB15 166 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 H0YJW9 148 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 SOCS1O15524 211 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 SOX15O60248 233 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 RBBP9O75884 186 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 NHLRC4P0CG21 123 aaPredicted RBP6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 SLC2A2P11168 524 aaPredicted RBP6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 CPEP16870 476 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 BLVRBP30043 206 aaPredicted RBP6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 MC5RP33032 325 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 RAB9AP51151 201 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 INSL3P51460 131 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 NDPQ00604 133 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 HSD17B12Q53GQ0 312 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 NKAPLQ5M9Q1 402 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 C9orf66Q5T8R8 295 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 CD200R1LQ6Q8B3 271 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 MOB1BQ7L9L4 216 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 OR2AK2Q8NG84 335 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 OR11H1Q8NG94 326 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 TMED9Q9BVK6 235 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 PARP12Q9H0J9 701 aaKnown RBP6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 Q9N2K0 584 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 ABRACLQ9P1F3 81 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 STEAP1Q9UHE8 339 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 MGAT4AQ9UM21 535 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 VSIG4Q9Y279 399 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 FBXO7Q9Y3I1 522 aa6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
SMARCB1-207ENST00000491967 TRAV41A0A0B4J266 112 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 FCN1O00602 326 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 RRHO14718 337 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 ST8SIA5O15466 376 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 OR8U8P0C7N1 319 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 MYF6P23409 242 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 CRHBPP24387 322 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 PSMA1P25786 263 aaKnown RBP6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 CX3CL1P78423 397 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 MLLT11Q13015 90 aaPredicted RBP6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 TRAM1Q15629 374 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 AKIRIN2Q53H80 203 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 RPL39P5Q59GN2 51 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 RBM48Q5RL73 367 aaKnown RBP6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 LIPKQ5VXJ0 399 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 TCTEX1D1Q8N7M0 179 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 OR1N2Q8NGR9 330 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 C11orf54Q9H0W9 315 aaPredicted RBP6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 VCXQ9H320 206 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 KCNK15Q9H427 330 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 GNB4Q9HAV0 340 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 PLEKHJ1Q9NW61 149 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 SCN3BQ9NY72 215 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 AK3Q9UIJ7 227 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 GAB2Q9UQC2 676 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 KCNK7Q9Y2U2 307 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 WSB1Q9Y6I7 421 aa6.49□□□□□ -1.37
SMARCB1-207ENST00000491967 IGKV1-6A0A0C4DH72 117 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 SEC14L6B5MCN3 397 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 BRI3O95415 125 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 DIRAS3O95661 229 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 ARSBP15848 533 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 ZBTB25P24278 435 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 RPS25P62851 125 aaKnown RBP6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 GNB1P62873 340 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 CD69Q07108 199 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF616Q08AN1 781 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 MED22Q15528 200 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 C2orf76Q3KRA6 126 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 TMEM65Q6PI78 240 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 FAM131AQ6UXB0 335 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF562Q6V9R5 426 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 IL1F10Q8WWZ1 152 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 UFD1Q92890 307 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 TMEM203Q969S6 136 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 FAM3DQ96BQ1 224 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 HDHD3Q9BSH5 251 aaPredicted RBP6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 URM1Q9BTM9 101 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms