RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CT45A7P0DMV0 189 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 GTF2F2P13984 249 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 IGFBP3P17936 291 aaPredicted RBP10.05□□□□□ -0.8
USF1-206ENST00000491629 TPPP2P59282 170 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
USF1-206ENST00000491629 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
USF1-206ENST00000491629 AKIRIN2Q53H80 203 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 ACTBL2Q562R1 376 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 MEDAGQ5VYS4 303 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 RAB12Q6IQ22 244 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 GLDNQ6ZMI3 551 aaPredicted RBP10.05□□□□□ -0.8
USF1-206ENST00000491629 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 STX19Q8N4C7 294 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 LFNGQ8NES3 379 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 OR13C5Q8NGS8 318 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
USF1-206ENST00000491629 TMEM138Q9NPI0 162 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 GMPPBQ9Y5P6 360 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 UBE2QL1A1L167 161 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 MCRIP1C9JLW8 97 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 H3BNX3 289 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 FADS2O95864 444 aaKnown RBP10.04□□□□□ -0.8
USF1-206ENST00000491629 ALPLP05186 524 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 GSTT2P0CG29 244 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 GSTT2BP0CG30 244 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 BDKRB2P30411 391 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 ZIK1Q3SY52 487 aaPredicted RBP10.04□□□□□ -0.8
USF1-206ENST00000491629 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 GPR148Q8TDV2 347 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 CENPNQ96H22 339 aaPredicted RBP10.04□□□□□ -0.8
USF1-206ENST00000491629 RDH12Q96NR8 316 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 CLCC1Q96S66 551 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 TMED9Q9BVK6 235 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 PARP12Q9H0J9 701 aaKnown RBP10.04□□□□□ -0.8
USF1-206ENST00000491629 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 RAB26Q9ULW5 256 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 ERGIC3Q9Y282 383 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 PEX16Q9Y5Y5 336 aa10.04□□□□□ -0.8
USF1-206ENST00000491629 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 YPEL1O60688 119 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 TPPPO94811 219 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 TNFAIP8O95379 198 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 TRGV3P03979 118 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 MAS1P04201 325 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 CSN3P07498 182 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 BCAP31P51572 246 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 MECP2P51608 486 aaKnown RBP10.03□□□□□ -0.8
USF1-206ENST00000491629 GBX2P52951 348 aaPredicted RBP10.03□□□□□ -0.8
USF1-206ENST00000491629 HTD2P86397 168 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 DEFA5Q01523 94 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 TRAT1Q6PIZ9 186 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 OR52I1Q8NGK6 324 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 LINC00476Q8WZB0 136 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 BORCS5Q969J3 196 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 MUL1Q969V5 352 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 BANF2Q9H503 90 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 SPACA1Q9HBV2 294 aa10.03□□□□□ -0.8
USF1-206ENST00000491629 PAK1IP1Q9NWT1 392 aaPredicted RBP10.03□□□□□ -0.8
USF1-206ENST00000491629 ANKRD34BA5PLL1 514 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 RBMY1BA6NDE4 496 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 RBMY1EA6NEQ0 496 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 H0YJW9 148 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 BOLA2-SMG1P6H3BVE0 249 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 PROP1O75360 226 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 RBMXL2O75526 392 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 BRI3O95415 125 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 LALBAP00709 142 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 TRBV12-3P01733 135 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 CD2P06729 351 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 RBMY1DP0C7P1 496 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 HSPA13P48723 471 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 SYNJ2BPP57105 145 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 TMEM267Q0VDI3 215 aaPredicted RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 MRPL28Q13084 256 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 DMKNQ6E0U4 476 aaPredicted RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 GLIPR1L1Q6UWM5 242 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 ABHD5Q8WTS1 349 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 MRPS24Q96EL2 167 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 MRPL48Q96GC5 212 aaKnown RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 OR14A2Q96R54 314 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 S100A13Q99584 98 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 TUBA4BQ9H853 241 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 S100A14Q9HCY8 104 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 RANGRFQ9HD47 186 aaPredicted RBP10.02□□□□□ -0.81
USF1-206ENST00000491629 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
USF1-206ENST00000491629 TRBV5-5A0A0J9YX44 114 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms