RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 HMGN3Q15651 99 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 LIN54Q6MZP7 749 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 C10orf99Q6UWK7 81 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 GFI1Q99684 422 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 C12orf4Q9NQ89 552 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 SSR3Q9UNL2 185 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 METTL21EPA6NDL7 271 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 NBR2O15453 112 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 SCGNO76038 276 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 SCAND1P57086 179 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 C2orf76Q3KRA6 126 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 TIMM50Q3ZCQ8 353 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 OR5M8Q8NGP6 311 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 CMSS1Q9BQ75 279 aaKnown RBP13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF221Q9UK13 617 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
PDLIM2-217ENST00000491330 OR5H14A6NHG9 310 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF736B4DX44 427 aaPredicted RBP13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 H7C2Y5 167 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 CCL24O00175 119 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 LDLRAD4O15165 306 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 RBBP9O75884 186 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 DIRAS3O95661 229 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 IGF1P05019 195 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 CEACAM6P40199 344 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 SERPINB10P48595 397 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 GNMTQ14749 295 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 Q6ZPA2 131 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 FAM71E2Q8N5Q1 922 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 LINC00482Q8N8I6 264 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 NICN1Q9BSH3 213 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 PLSCR3Q9NRY6 295 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 VWFP04275 2813 aa13.05□□□□□ -0.32
PDLIM2-217ENST00000491330 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 NOTOA8MTQ0 251 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 TNFAIP8O95379 198 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 CD3GP09693 182 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 VEGFCP49767 419 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 F2RL1P55085 397 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 CBX3Q13185 183 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 KIR2DS1Q14954 304 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 RNF5Q99942 180 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 NABP2Q9BQ15 211 aa13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 MRPL20Q9BYC9 149 aaKnown RBP13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 TXNL4BQ9NX01 149 aaKnown RBP13.04□□□□□ -0.32
PDLIM2-217ENST00000491330 SAA2-SAA4A0A096LPE2 208 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 RAMP3O60896 148 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 IGHG4P01861 327 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 SAA2P0DJI9 122 aaPredicted RBP13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 TALDO1P37837 337 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 HLA-DRB3P79483 266 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 C22orf42Q6IC83 251 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 OR51J1Q9H342 316 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 PARP11Q9NR21 331 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
PDLIM2-217ENST00000491330 A0A087WXM4 84 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 TMEM272A0A1B0GTI8 110 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 TRDCB7Z8K6 153 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 ST8SIA5O15466 376 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 SOCS1O15524 211 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 HLA-DRB1P01911 266 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 APOA2P02652 100 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 RPLP1P05386 114 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 SRSF7Q16629 238 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 C5orf64Q2M2E5 130 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 ZNF660Q6AZW8 331 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 TCTEX1D1Q8N7M0 179 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 C4orf3Q8WVX3 66 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 RAB3CQ96E17 227 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 WASHC3Q9Y3C0 194 aa13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-217ENST00000491330 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 TRAV41A0A0B4J266 112 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 OR3A3P47888 321 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 TMEM50BP56557 158 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 DGCR2P98153 550 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 HES5Q5TA89 166 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 NPBQ8NG41 125 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 ARHGAP5-AS1Q96IT6 56 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 P2RX4Q99571 388 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms