RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 KIAA0141Q14154 515 aaPredicted RBP10.61□□□□□ -0.71
COL6A3-211ENST00000491233 SPHARQ15513 63 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 ZNF260Q3ZCT1 412 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 RPL39P5Q59GN2 51 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 LIN54Q6MZP7 749 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 ZNF880Q6PDB4 577 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 ZNF491Q8N8L2 437 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 NPBQ8NG41 125 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 OR6M1Q8NGM8 313 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 VSIG4Q9Y279 399 aa10.61□□□□□ -0.71
COL6A3-211ENST00000491233 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
COL6A3-211ENST00000491233 A0A1W2PN81 502 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 I3L521 148 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 RAB29O14966 203 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 BPNT1O95861 308 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 UCHL1P09936 223 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 SRMP19623 302 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 CHRNA7P36544 502 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 HLA-DRB3P79483 266 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 QRFPP83859 136 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 RUNX1Q01196 453 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 P2RY14Q15391 338 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 GLDNQ6ZMI3 551 aaPredicted RBP10.6□□□□□ -0.71
COL6A3-211ENST00000491233 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 UFD1Q92890 307 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 ABHD14BQ96IU4 210 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 HDHD3Q9BSH5 251 aaPredicted RBP10.6□□□□□ -0.71
COL6A3-211ENST00000491233 LPAR5Q9H1C0 372 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 FBXL15Q9H469 300 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 PLEKHJ1Q9NW61 149 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
COL6A3-211ENST00000491233 FBXO7Q9Y3I1 522 aa10.6□□□□□ -0.71
COL6A3-211ENST00000491233 OR5H14A6NHG9 310 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 RRHO14718 337 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 SOCS1O15524 211 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 LY86O95711 162 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 CT45A6P0DMU7 189 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 CT45A5P0DMU8 189 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 CT45A7P0DMV0 189 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 CD37P11049 281 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 RAB9AP51151 201 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 IRF3Q14653 427 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 PLGLAQ15195 96 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 C19orf54Q5BKX5 351 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 MINDY2Q8NBR6 621 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 TMEM203Q969S6 136 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 GFI1Q99684 422 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 URM1Q9BTM9 101 aaKnown RBP10.59□□□□□ -0.71
COL6A3-211ENST00000491233 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 ISYNA1Q9NPH2 558 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 SCN3BQ9NY72 215 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 OR1A1Q9P1Q5 309 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 AK3Q9UIJ7 227 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 A3GALT2U3KPV4 340 aa10.59□□□□□ -0.71
COL6A3-211ENST00000491233 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
COL6A3-211ENST00000491233 TRBV6-6A0A0A6YYG2 114 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 H0YJW9 148 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 H7C2Y5 167 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 SOX15O60248 233 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 GSTP1P09211 210 aaKnown RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 NHLRC4P0CG21 123 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 RPS25P62851 125 aaKnown RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 ZNF660Q6AZW8 331 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 ALX4Q9H161 411 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 RIMS4Q9H426 269 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
COL6A3-211ENST00000491233 U3KQK5 164 aa10.58□□□□□ -0.72
COL6A3-211ENST00000491233 FOXI3A8MTJ6 420 aaPredicted RBP10.57□□□□□ -0.72
COL6A3-211ENST00000491233 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 SLC17A2O00624 439 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 ITGB1BP1O14713 200 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 OVOL1O14753 267 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 HSPA12AO43301 675 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 HSMCR30P0CW71 290 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 ARSBP15848 533 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 INSL3P51460 131 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 SLURP1P55000 103 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 AQP4P55087 323 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 CX3CL1P78423 397 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 RAB11BQ15907 218 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 TMEM91Q6ZNR0 172 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 ASCL2Q99929 193 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 AGMATQ9BSE5 352 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
COL6A3-211ENST00000491233 C11orf54Q9H0W9 315 aaPredicted RBP10.57□□□□□ -0.72
COL6A3-211ENST00000491233 C12orf4Q9NQ89 552 aa10.57□□□□□ -0.72
COL6A3-211ENST00000491233 GAB2Q9UQC2 676 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms